Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
C3orf56Q8N813 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
C3orf56Q8N813 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
C3orf56Q8N813 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
C3orf56Q8N813 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
C3orf56Q8N813 AC134312.5-201ENST00000568031 1313 ntBASIC12.47□□□□□ -0.41
C3orf56Q8N813 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
C3orf56Q8N813 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
C3orf56Q8N813 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
C3orf56Q8N813 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
C3orf56Q8N813 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.47□□□□□ -0.41
C3orf56Q8N813 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC12.47□□□□□ -0.41
C3orf56Q8N813 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC12.47□□□□□ -0.41
C3orf56Q8N813 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC12.47□□□□□ -0.41
C3orf56Q8N813 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.47□□□□□ -0.41
C3orf56Q8N813 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
C3orf56Q8N813 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC12.47□□□□□ -0.41
C3orf56Q8N813 RERG-205ENST00000537647 935 ntTSL 2 BASIC12.47□□□□□ -0.41
C3orf56Q8N813 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.47□□□□□ -0.41
C3orf56Q8N813 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
C3orf56Q8N813 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.47□□□□□ -0.41
C3orf56Q8N813 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC12.47□□□□□ -0.41
C3orf56Q8N813 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.47□□□□□ -0.41
C3orf56Q8N813 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
C3orf56Q8N813 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
C3orf56Q8N813 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
C3orf56Q8N813 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC12.47□□□□□ -0.41
C3orf56Q8N813 AC068880.1-201ENST00000507289 2297 ntBASIC12.47□□□□□ -0.41
C3orf56Q8N813 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
C3orf56Q8N813 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC12.47□□□□□ -0.41
C3orf56Q8N813 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
C3orf56Q8N813 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
C3orf56Q8N813 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC12.47□□□□□ -0.41
C3orf56Q8N813 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
C3orf56Q8N813 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
C3orf56Q8N813 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
C3orf56Q8N813 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
C3orf56Q8N813 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
C3orf56Q8N813 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.47□□□□□ -0.41
C3orf56Q8N813 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
C3orf56Q8N813 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
C3orf56Q8N813 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
C3orf56Q8N813 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
C3orf56Q8N813 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
C3orf56Q8N813 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
C3orf56Q8N813 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
C3orf56Q8N813 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
C3orf56Q8N813 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC12.47□□□□□ -0.41
C3orf56Q8N813 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
C3orf56Q8N813 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC12.47□□□□□ -0.41
C3orf56Q8N813 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
C3orf56Q8N813 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
C3orf56Q8N813 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
C3orf56Q8N813 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
C3orf56Q8N813 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
C3orf56Q8N813 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
C3orf56Q8N813 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
C3orf56Q8N813 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
C3orf56Q8N813 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
C3orf56Q8N813 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
C3orf56Q8N813 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
C3orf56Q8N813 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
C3orf56Q8N813 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
C3orf56Q8N813 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
C3orf56Q8N813 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.46□□□□□ -0.41
C3orf56Q8N813 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
C3orf56Q8N813 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC12.46□□□□□ -0.41
C3orf56Q8N813 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
C3orf56Q8N813 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC12.46□□□□□ -0.41
C3orf56Q8N813 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
C3orf56Q8N813 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC12.46□□□□□ -0.41
C3orf56Q8N813 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
C3orf56Q8N813 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC12.46□□□□□ -0.41
C3orf56Q8N813 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC12.46□□□□□ -0.41
C3orf56Q8N813 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
C3orf56Q8N813 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
C3orf56Q8N813 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
C3orf56Q8N813 MIR326-201ENST00000362220 95 ntBASIC12.46□□□□□ -0.41
C3orf56Q8N813 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
C3orf56Q8N813 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
C3orf56Q8N813 AC026954.1-201ENST00000429771 1293 ntBASIC12.46□□□□□ -0.41
C3orf56Q8N813 MPRIPP1-201ENST00000452433 1089 ntBASIC12.46□□□□□ -0.41
C3orf56Q8N813 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
C3orf56Q8N813 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC12.46□□□□□ -0.41
C3orf56Q8N813 NEU3-202ENST00000526068 431 ntTSL 2 BASIC12.46□□□□□ -0.41
C3orf56Q8N813 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.46□□□□□ -0.41
C3orf56Q8N813 DUX4L45-201ENST00000566406 1057 ntBASIC12.46□□□□□ -0.41
C3orf56Q8N813 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.46□□□□□ -0.41
C3orf56Q8N813 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
C3orf56Q8N813 SPIB-207ENST00000597855 564 ntTSL 4 BASIC12.46□□□□□ -0.41
C3orf56Q8N813 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.46□□□□□ -0.41
C3orf56Q8N813 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC12.46□□□□□ -0.41
C3orf56Q8N813 HCG18-245ENST00000602550 559 ntTSL 4 BASIC12.46□□□□□ -0.41
C3orf56Q8N813 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
C3orf56Q8N813 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.46□□□□□ -0.41
C3orf56Q8N813 AL158212.4-201ENST00000624062 1286 ntBASIC12.46□□□□□ -0.41
C3orf56Q8N813 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
C3orf56Q8N813 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
C3orf56Q8N813 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
C3orf56Q8N813 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms