Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 MYB-201ENST00000316528 3571 ntTSL 5 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 MYB-241ENST00000616088 3573 ntTSL 5 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 BNIP3P1-202ENST00000550043 1585 ntBASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC12.64□□□□□ -0.39
TTC9CQ8N5M4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 AC254562.1-201ENST00000417586 456 ntBASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 FAM58DP-201ENST00000428076 619 ntBASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 AL353705.2-201ENST00000428243 662 ntBASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 AC018529.1-201ENST00000613063 361 ntBASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 AC105917.1-201ENST00000506637 2539 ntBASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TTC9CQ8N5M4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 SBF1P1-201ENST00000444527 5631 ntBASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 VILL-207ENST00000465644 1857 ntTSL 5 BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms