Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PHTF2Q8N3S3 MIR6069-201ENST00000620069 79 ntBASIC16.48■□□□□ 0.23
PHTF2Q8N3S3 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.48■□□□□ 0.23
PHTF2Q8N3S3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PHTF2Q8N3S3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
PHTF2Q8N3S3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.48■□□□□ 0.23
PHTF2Q8N3S3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PHTF2Q8N3S3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.48■□□□□ 0.23
PHTF2Q8N3S3 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PHTF2Q8N3S3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PHTF2Q8N3S3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
PHTF2Q8N3S3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
PHTF2Q8N3S3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PHTF2Q8N3S3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.48■□□□□ 0.23
PHTF2Q8N3S3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.48■□□□□ 0.23
PHTF2Q8N3S3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PHTF2Q8N3S3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PHTF2Q8N3S3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PHTF2Q8N3S3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 CYP4F24P-201ENST00000586049 1580 ntBASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 AC068418.2-201ENST00000577309 3703 ntBASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 OR8S1-201ENST00000310194 1080 ntBASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 AC098614.1-201ENST00000368528 745 ntBASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 AC087499.6-201ENST00000411576 835 ntBASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PHTF2Q8N3S3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 AC023310.3-201ENST00000557027 670 ntBASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 AC100756.1-201ENST00000562736 682 ntBASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 AC138749.3-201ENST00000567691 622 ntBASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 AC092337.1-201ENST00000568699 1129 ntBASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 AC025048.3-201ENST00000590609 569 ntBASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 AC008494.3-201ENST00000606615 944 ntBASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 AC116165.1-201ENST00000611806 668 ntBASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 AC005702.4-201ENST00000618393 416 ntBASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 IGHV3-72-202ENST00000621503 303 ntBASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 AC092850.2-201ENST00000623821 2697 ntBASIC16.46■□□□□ 0.23
PHTF2Q8N3S3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms