Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 DIO1-215ENST00000610607 796 ntTSL 5 BASIC18.98■□□□□ 0.63
SLX4Q8IY92 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC18.98■□□□□ 0.63
SLX4Q8IY92 AP000346.4-201ENST00000614827 381 ntBASIC18.98■□□□□ 0.63
SLX4Q8IY92 AC244157.2-201ENST00000616239 1006 ntBASIC18.98■□□□□ 0.63
SLX4Q8IY92 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLX4Q8IY92 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLX4Q8IY92 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLX4Q8IY92 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC18.98■□□□□ 0.63
SLX4Q8IY92 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC18.98■□□□□ 0.63
SLX4Q8IY92 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLX4Q8IY92 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLX4Q8IY92 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.98■□□□□ 0.63
SLX4Q8IY92 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.98■□□□□ 0.63
SLX4Q8IY92 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLX4Q8IY92 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLX4Q8IY92 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLX4Q8IY92 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLX4Q8IY92 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
SLX4Q8IY92 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SLX4Q8IY92 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLX4Q8IY92 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SLX4Q8IY92 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.98■□□□□ 0.63
SLX4Q8IY92 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLX4Q8IY92 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLX4Q8IY92 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLX4Q8IY92 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLX4Q8IY92 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC18.97■□□□□ 0.63
SLX4Q8IY92 AL139094.1-201ENST00000405549 1188 ntBASIC18.97■□□□□ 0.63
SLX4Q8IY92 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC18.97■□□□□ 0.63
SLX4Q8IY92 FADS2-212ENST00000522639 360 ntTSL 5 BASIC18.97■□□□□ 0.63
SLX4Q8IY92 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC18.97■□□□□ 0.63
SLX4Q8IY92 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC18.97■□□□□ 0.63
SLX4Q8IY92 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC18.97■□□□□ 0.63
SLX4Q8IY92 FADS2-215ENST00000574708 385 ntTSL 3 BASIC18.97■□□□□ 0.63
SLX4Q8IY92 ZACNP1-201ENST00000612259 710 ntBASIC18.97■□□□□ 0.63
SLX4Q8IY92 AC022748.3-201ENST00000621828 275 ntBASIC18.97■□□□□ 0.63
SLX4Q8IY92 AP001002.3-201ENST00000623482 206 ntBASIC18.97■□□□□ 0.63
SLX4Q8IY92 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SLX4Q8IY92 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLX4Q8IY92 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
SLX4Q8IY92 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLX4Q8IY92 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLX4Q8IY92 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLX4Q8IY92 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLX4Q8IY92 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLX4Q8IY92 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLX4Q8IY92 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLX4Q8IY92 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLX4Q8IY92 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLX4Q8IY92 RPL17P11-201ENST00000417593 544 ntBASIC18.97■□□□□ 0.63
SLX4Q8IY92 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLX4Q8IY92 AC114812.1-204ENST00000449669 728 ntBASIC18.97■□□□□ 0.63
SLX4Q8IY92 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLX4Q8IY92 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC18.97■□□□□ 0.63
SLX4Q8IY92 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLX4Q8IY92 MBP-227ENST00000526111 581 ntTSL 4 BASIC18.97■□□□□ 0.63
SLX4Q8IY92 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC18.97■□□□□ 0.63
SLX4Q8IY92 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SLX4Q8IY92 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SLX4Q8IY92 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SLX4Q8IY92 KRT8P14-201ENST00000414254 1442 ntBASIC18.97■□□□□ 0.63
SLX4Q8IY92 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLX4Q8IY92 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLX4Q8IY92 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SLX4Q8IY92 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC18.96■□□□□ 0.63
SLX4Q8IY92 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLX4Q8IY92 AC106820.2-201ENST00000563775 3264 ntBASIC18.96■□□□□ 0.63
SLX4Q8IY92 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLX4Q8IY92 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLX4Q8IY92 GHSR-202ENST00000427970 912 ntBASIC18.96■□□□□ 0.63
SLX4Q8IY92 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC18.96■□□□□ 0.63
SLX4Q8IY92 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.96■□□□□ 0.63
SLX4Q8IY92 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC18.96■□□□□ 0.63
SLX4Q8IY92 AC026740.1-201ENST00000607068 791 ntBASIC18.96■□□□□ 0.63
SLX4Q8IY92 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SLX4Q8IY92 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLX4Q8IY92 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
SLX4Q8IY92 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLX4Q8IY92 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLX4Q8IY92 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SLX4Q8IY92 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.96■□□□□ 0.63
SLX4Q8IY92 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
SLX4Q8IY92 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLX4Q8IY92 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.96■□□□□ 0.62
SLX4Q8IY92 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SLX4Q8IY92 MIR648-201ENST00000385046 94 ntBASIC18.95■□□□□ 0.62
SLX4Q8IY92 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC18.95■□□□□ 0.62
SLX4Q8IY92 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC18.95■□□□□ 0.62
SLX4Q8IY92 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC18.95■□□□□ 0.62
SLX4Q8IY92 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC18.95■□□□□ 0.62
SLX4Q8IY92 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC18.95■□□□□ 0.62
SLX4Q8IY92 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC18.95■□□□□ 0.62
SLX4Q8IY92 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
SLX4Q8IY92 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC18.95■□□□□ 0.62
SLX4Q8IY92 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLX4Q8IY92 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLX4Q8IY92 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLX4Q8IY92 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SLX4Q8IY92 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC18.95■□□□□ 0.62
SLX4Q8IY92 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms