Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HERC6Q8IVU3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HERC6Q8IVU3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.15■□□□□ 0.34
HERC6Q8IVU3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HERC6Q8IVU3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
HERC6Q8IVU3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.15■□□□□ 0.34
HERC6Q8IVU3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HERC6Q8IVU3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
HERC6Q8IVU3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
HERC6Q8IVU3 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
HERC6Q8IVU3 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.15■□□□□ 0.34
HERC6Q8IVU3 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HERC6Q8IVU3 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.15■□□□□ 0.34
HERC6Q8IVU3 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.15■□□□□ 0.34
HERC6Q8IVU3 AC093433.1-201ENST00000458048 571 ntBASIC17.15■□□□□ 0.34
HERC6Q8IVU3 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.15■□□□□ 0.34
HERC6Q8IVU3 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.15■□□□□ 0.34
HERC6Q8IVU3 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.15■□□□□ 0.34
HERC6Q8IVU3 AC243562.2-201ENST00000561247 970 ntBASIC17.15■□□□□ 0.34
HERC6Q8IVU3 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.15■□□□□ 0.34
HERC6Q8IVU3 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.15■□□□□ 0.34
HERC6Q8IVU3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.15■□□□□ 0.34
HERC6Q8IVU3 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HERC6Q8IVU3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HERC6Q8IVU3 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HERC6Q8IVU3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HERC6Q8IVU3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HERC6Q8IVU3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
HERC6Q8IVU3 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HERC6Q8IVU3 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HERC6Q8IVU3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
HERC6Q8IVU3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HERC6Q8IVU3 AL603756.1-201ENST00000606511 2163 ntBASIC17.15■□□□□ 0.34
HERC6Q8IVU3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HERC6Q8IVU3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.15■□□□□ 0.34
HERC6Q8IVU3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HERC6Q8IVU3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.15■□□□□ 0.34
HERC6Q8IVU3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
HERC6Q8IVU3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.14■□□□□ 0.34
HERC6Q8IVU3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
HERC6Q8IVU3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
HERC6Q8IVU3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.14■□□□□ 0.33
HERC6Q8IVU3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 RNA5SP423-201ENST00000517127 109 ntBASIC17.14■□□□□ 0.33
HERC6Q8IVU3 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 AC005252.2-201ENST00000624630 1141 ntBASIC17.14■□□□□ 0.33
HERC6Q8IVU3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
HERC6Q8IVU3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 AC005915.1-201ENST00000624912 2018 ntBASIC17.13■□□□□ 0.33
HERC6Q8IVU3 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 UBALD1-205ENST00000590891 2641 ntBASIC17.13■□□□□ 0.33
HERC6Q8IVU3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HERC6Q8IVU3 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms