Protein–RNA interactions for Protein: Q8IUF1

CBWD2, COBW domain-containing protein 2, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD2Q8IUF1 AC105917.1-201ENST00000506637 2539 ntBASIC17.26■□□□□ 0.35
CBWD2Q8IUF1 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBWD2Q8IUF1 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBWD2Q8IUF1 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.26■□□□□ 0.35
CBWD2Q8IUF1 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBWD2Q8IUF1 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.26■□□□□ 0.35
CBWD2Q8IUF1 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBWD2Q8IUF1 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBWD2Q8IUF1 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBWD2Q8IUF1 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBWD2Q8IUF1 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.26■□□□□ 0.35
CBWD2Q8IUF1 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 MIR770-201ENST00000390219 98 ntBASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 BASP1P1-201ENST00000430708 665 ntBASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 Z97205.2-201ENST00000564697 1639 ntBASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBWD2Q8IUF1 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.24■□□□□ 0.35
CBWD2Q8IUF1 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CBWD2Q8IUF1 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CBWD2Q8IUF1 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CBWD2Q8IUF1 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBWD2Q8IUF1 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CBWD2Q8IUF1 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CBWD2Q8IUF1 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBWD2Q8IUF1 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBWD2Q8IUF1 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.24■□□□□ 0.35
CBWD2Q8IUF1 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CBWD2Q8IUF1 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBWD2Q8IUF1 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CBWD2Q8IUF1 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CBWD2Q8IUF1 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CBWD2Q8IUF1 MRPS18AP1-201ENST00000414458 589 ntBASIC17.24■□□□□ 0.35
CBWD2Q8IUF1 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.24■□□□□ 0.35
CBWD2Q8IUF1 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.24■□□□□ 0.35
CBWD2Q8IUF1 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.24■□□□□ 0.35
CBWD2Q8IUF1 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.24■□□□□ 0.35
CBWD2Q8IUF1 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.24■□□□□ 0.35
CBWD2Q8IUF1 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBWD2Q8IUF1 AC009090.5-201ENST00000624886 2285 ntBASIC17.24■□□□□ 0.35
CBWD2Q8IUF1 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBWD2Q8IUF1 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBWD2Q8IUF1 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.24■□□□□ 0.35
CBWD2Q8IUF1 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBWD2Q8IUF1 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBWD2Q8IUF1 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
CBWD2Q8IUF1 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBWD2Q8IUF1 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.23■□□□□ 0.35
CBWD2Q8IUF1 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.23■□□□□ 0.35
CBWD2Q8IUF1 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.23■□□□□ 0.35
CBWD2Q8IUF1 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CBWD2Q8IUF1 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.23■□□□□ 0.35
CBWD2Q8IUF1 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CBWD2Q8IUF1 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBWD2Q8IUF1 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBWD2Q8IUF1 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.23■□□□□ 0.35
CBWD2Q8IUF1 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBWD2Q8IUF1 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBWD2Q8IUF1 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBWD2Q8IUF1 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.23■□□□□ 0.35
CBWD2Q8IUF1 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.23■□□□□ 0.35
CBWD2Q8IUF1 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.23■□□□□ 0.35
CBWD2Q8IUF1 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.23■□□□□ 0.35
CBWD2Q8IUF1 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.23■□□□□ 0.35
CBWD2Q8IUF1 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms