Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.76□□□□□ -0.05
VRK2Q86Y07 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VRK2Q86Y07 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
VRK2Q86Y07 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VRK2Q86Y07 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VRK2Q86Y07 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
VRK2Q86Y07 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VRK2Q86Y07 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VRK2Q86Y07 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VRK2Q86Y07 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VRK2Q86Y07 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
VRK2Q86Y07 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
VRK2Q86Y07 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.75□□□□□ -0.05
VRK2Q86Y07 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VRK2Q86Y07 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VRK2Q86Y07 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VRK2Q86Y07 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
VRK2Q86Y07 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VRK2Q86Y07 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.75□□□□□ -0.05
VRK2Q86Y07 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.75□□□□□ -0.05
VRK2Q86Y07 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
VRK2Q86Y07 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
VRK2Q86Y07 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VRK2Q86Y07 ELL2P1-201ENST00000413990 1906 ntBASIC14.75□□□□□ -0.05
VRK2Q86Y07 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VRK2Q86Y07 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VRK2Q86Y07 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
VRK2Q86Y07 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.75□□□□□ -0.05
VRK2Q86Y07 AP000347.1-202ENST00000435868 847 ntBASIC14.75□□□□□ -0.05
VRK2Q86Y07 CEND1P1-201ENST00000451006 455 ntBASIC14.75□□□□□ -0.05
VRK2Q86Y07 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
VRK2Q86Y07 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.75□□□□□ -0.05
VRK2Q86Y07 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
VRK2Q86Y07 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.75□□□□□ -0.05
VRK2Q86Y07 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.75□□□□□ -0.05
VRK2Q86Y07 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.75□□□□□ -0.05
VRK2Q86Y07 MIR4313-201ENST00000580760 101 ntBASIC14.75□□□□□ -0.05
VRK2Q86Y07 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.75□□□□□ -0.05
VRK2Q86Y07 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.75□□□□□ -0.05
VRK2Q86Y07 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VRK2Q86Y07 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
VRK2Q86Y07 CYP4F24P-201ENST00000586049 1580 ntBASIC14.75□□□□□ -0.05
VRK2Q86Y07 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.75□□□□□ -0.05
VRK2Q86Y07 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
VRK2Q86Y07 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.75□□□□□ -0.05
VRK2Q86Y07 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VRK2Q86Y07 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VRK2Q86Y07 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
VRK2Q86Y07 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.75□□□□□ -0.05
VRK2Q86Y07 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VRK2Q86Y07 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VRK2Q86Y07 AC068587.6-202ENST00000641839 5619 ntBASIC14.75□□□□□ -0.05
VRK2Q86Y07 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VRK2Q86Y07 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
VRK2Q86Y07 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VRK2Q86Y07 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VRK2Q86Y07 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.74□□□□□ -0.05
VRK2Q86Y07 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
VRK2Q86Y07 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VRK2Q86Y07 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.74□□□□□ -0.05
VRK2Q86Y07 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
VRK2Q86Y07 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VRK2Q86Y07 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VRK2Q86Y07 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.74□□□□□ -0.05
VRK2Q86Y07 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.74□□□□□ -0.05
VRK2Q86Y07 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
VRK2Q86Y07 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
VRK2Q86Y07 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
VRK2Q86Y07 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.74□□□□□ -0.05
VRK2Q86Y07 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VRK2Q86Y07 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VRK2Q86Y07 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VRK2Q86Y07 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VRK2Q86Y07 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
VRK2Q86Y07 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.74□□□□□ -0.05
VRK2Q86Y07 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
VRK2Q86Y07 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.74□□□□□ -0.05
VRK2Q86Y07 AL139010.1-201ENST00000454878 894 ntBASIC14.74□□□□□ -0.05
VRK2Q86Y07 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.74□□□□□ -0.05
VRK2Q86Y07 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.74□□□□□ -0.05
VRK2Q86Y07 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
VRK2Q86Y07 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.74□□□□□ -0.05
VRK2Q86Y07 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.74□□□□□ -0.05
VRK2Q86Y07 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
VRK2Q86Y07 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.74□□□□□ -0.05
VRK2Q86Y07 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VRK2Q86Y07 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VRK2Q86Y07 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.74□□□□□ -0.05
VRK2Q86Y07 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.74□□□□□ -0.05
VRK2Q86Y07 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VRK2Q86Y07 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VRK2Q86Y07 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VRK2Q86Y07 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
VRK2Q86Y07 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.74□□□□□ -0.05
VRK2Q86Y07 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.74□□□□□ -0.05
VRK2Q86Y07 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
VRK2Q86Y07 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VRK2Q86Y07 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VRK2Q86Y07 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
VRK2Q86Y07 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms