Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.61■□□□□ 0.09
LRRTM4Q86VH4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 AC092337.1-201ENST00000568699 1129 ntBASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 AL391005.1-201ENST00000623953 2435 ntBASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 DOC2GP-204ENST00000639052 2548 ntBASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 AL139384.1-201ENST00000612143 3047 ntBASIC15.6■□□□□ 0.09
LRRTM4Q86VH4 CICP6-201ENST00000457191 2729 ntBASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 FER1L4-210ENST00000615531 5998 ntBASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 SPDYE19P-201ENST00000338590 713 ntBASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 AC097359.3-201ENST00000603982 1210 ntBASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 LINC01115-203ENST00000606068 577 ntBASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM4Q86VH4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms