Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 AC018892.3-201ENST00000623986 2499 ntBASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 HCG4P8-203ENST00000443049 980 ntBASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 PRELID1P1-202ENST00000567272 903 ntBASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 PRR29-207ENST00000580752 458 ntTSL 3 BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 LINC01711-201ENST00000598340 967 ntBASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LRRTM1Q86UE6 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 AL390755.1-201ENST00000623716 2027 ntBASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 AC005089.1-201ENST00000619486 2241 ntBASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 AC127383.1-201ENST00000444697 1800 ntBASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 AC026396.1-201ENST00000419388 421 ntBASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 TP73-AS1-207ENST00000624167 988 ntBASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 AC117500.6-201ENST00000624871 588 ntBASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
LRRTM1Q86UE6 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms