Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 AC090616.6-203ENST00000579186 1945 ntBASIC14.43□□□□□ -0.1
ATG4DQ86TL0 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 MIR4453-201ENST00000584019 89 ntBASIC14.43□□□□□ -0.1
ATG4DQ86TL0 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 LINC02084-201ENST00000606069 1096 ntBASIC14.43□□□□□ -0.1
ATG4DQ86TL0 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 AC013268.4-201ENST00000637413 2228 ntBASIC14.43□□□□□ -0.1
ATG4DQ86TL0 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATG4DQ86TL0 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 AC087481.3-201ENST00000602886 1894 ntBASIC14.42□□□□□ -0.1
ATG4DQ86TL0 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 AC136604.1-201ENST00000418535 575 ntBASIC14.42□□□□□ -0.1
ATG4DQ86TL0 SPDYE7P-202ENST00000420373 878 ntBASIC14.42□□□□□ -0.1
ATG4DQ86TL0 FAM86GP-201ENST00000448322 971 ntBASIC14.42□□□□□ -0.1
ATG4DQ86TL0 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATG4DQ86TL0 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms