Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
VPS13BQ7Z7G8 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
VPS13BQ7Z7G8 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC9.62□□□□□ -0.87
VPS13BQ7Z7G8 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC9.62□□□□□ -0.87
VPS13BQ7Z7G8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC9.62□□□□□ -0.87
VPS13BQ7Z7G8 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC9.62□□□□□ -0.87
VPS13BQ7Z7G8 AC114501.1-201ENST00000445949 172 ntBASIC9.62□□□□□ -0.87
VPS13BQ7Z7G8 AL590640.2-201ENST00000457038 527 ntBASIC9.62□□□□□ -0.87
VPS13BQ7Z7G8 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
VPS13BQ7Z7G8 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC9.62□□□□□ -0.87
VPS13BQ7Z7G8 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC9.62□□□□□ -0.87
VPS13BQ7Z7G8 AC006480.2-201ENST00000609770 1337 ntBASIC9.62□□□□□ -0.87
VPS13BQ7Z7G8 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
VPS13BQ7Z7G8 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
VPS13BQ7Z7G8 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
VPS13BQ7Z7G8 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
VPS13BQ7Z7G8 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 FLII-221ENST00000578558 2377 ntTSL 5 BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 DEF8-202ENST00000418391 852 ntTSL 2 BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 KRT18P66-201ENST00000452970 1269 ntBASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 FTLP10-202ENST00000505798 471 ntBASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 MIR1202-201ENST00000408529 83 ntBASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 ACR-203ENST00000529621 708 ntTSL 5 BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 AC243562.2-201ENST00000561247 970 ntBASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC9.61□□□□□ -0.87
VPS13BQ7Z7G8 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
VPS13BQ7Z7G8 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
VPS13BQ7Z7G8 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
VPS13BQ7Z7G8 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
VPS13BQ7Z7G8 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC9.6□□□□□ -0.87
VPS13BQ7Z7G8 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC9.6□□□□□ -0.87
VPS13BQ7Z7G8 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
VPS13BQ7Z7G8 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC9.6□□□□□ -0.87
VPS13BQ7Z7G8 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC9.6□□□□□ -0.87
VPS13BQ7Z7G8 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC9.6□□□□□ -0.87
VPS13BQ7Z7G8 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC9.6□□□□□ -0.87
VPS13BQ7Z7G8 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
VPS13BQ7Z7G8 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
VPS13BQ7Z7G8 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC9.6□□□□□ -0.87
VPS13BQ7Z7G8 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
VPS13BQ7Z7G8 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
VPS13BQ7Z7G8 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC9.6□□□□□ -0.87
VPS13BQ7Z7G8 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
VPS13BQ7Z7G8 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
VPS13BQ7Z7G8 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
VPS13BQ7Z7G8 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
VPS13BQ7Z7G8 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC9.6□□□□□ -0.87
VPS13BQ7Z7G8 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
VPS13BQ7Z7G8 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms