Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.02■□□□□ 0.16
LYSMD3Q7Z3D4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LYSMD3Q7Z3D4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.02■□□□□ 0.16
LYSMD3Q7Z3D4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.02■□□□□ 0.16
LYSMD3Q7Z3D4 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.02■□□□□ 0.16
LYSMD3Q7Z3D4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.02■□□□□ 0.16
LYSMD3Q7Z3D4 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.02■□□□□ 0.16
LYSMD3Q7Z3D4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.02■□□□□ 0.16
LYSMD3Q7Z3D4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.02■□□□□ 0.16
LYSMD3Q7Z3D4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LYSMD3Q7Z3D4 AL390955.2-201ENST00000603032 514 ntBASIC16.02■□□□□ 0.16
LYSMD3Q7Z3D4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LYSMD3Q7Z3D4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
LYSMD3Q7Z3D4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
LYSMD3Q7Z3D4 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
LYSMD3Q7Z3D4 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LYSMD3Q7Z3D4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LYSMD3Q7Z3D4 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LYSMD3Q7Z3D4 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LYSMD3Q7Z3D4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LYSMD3Q7Z3D4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LYSMD3Q7Z3D4 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
LYSMD3Q7Z3D4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LYSMD3Q7Z3D4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.02■□□□□ 0.15
LYSMD3Q7Z3D4 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LYSMD3Q7Z3D4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LYSMD3Q7Z3D4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LYSMD3Q7Z3D4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LYSMD3Q7Z3D4 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LYSMD3Q7Z3D4 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 AZGP1P1-201ENST00000411909 902 ntBASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 FAM8A3P-201ENST00000427218 844 ntBASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 AC055876.3-201ENST00000431496 288 ntBASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 AC005498.2-205ENST00000593218 784 ntBASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 AC138649.4-201ENST00000612222 287 ntBASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 AL390754.1-201ENST00000619088 582 ntBASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 PRAL-201ENST00000624952 3286 ntBASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD3Q7Z3D4 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16■□□□□ 0.15
LYSMD3Q7Z3D4 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD3Q7Z3D4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16■□□□□ 0.15
LYSMD3Q7Z3D4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16■□□□□ 0.15
LYSMD3Q7Z3D4 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD3Q7Z3D4 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD3Q7Z3D4 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD3Q7Z3D4 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
LYSMD3Q7Z3D4 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
LYSMD3Q7Z3D4 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16■□□□□ 0.15
LYSMD3Q7Z3D4 AC144831.1-201ENST00000573312 2656 ntBASIC16■□□□□ 0.15
LYSMD3Q7Z3D4 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD3Q7Z3D4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD3Q7Z3D4 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD3Q7Z3D4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD3Q7Z3D4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16■□□□□ 0.15
LYSMD3Q7Z3D4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16■□□□□ 0.15
LYSMD3Q7Z3D4 HIST3H2BA-201ENST00000436555 524 ntBASIC16■□□□□ 0.15
LYSMD3Q7Z3D4 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16■□□□□ 0.15
LYSMD3Q7Z3D4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16■□□□□ 0.15
LYSMD3Q7Z3D4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
LYSMD3Q7Z3D4 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16■□□□□ 0.15
LYSMD3Q7Z3D4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD3Q7Z3D4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD3Q7Z3D4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16■□□□□ 0.15
LYSMD3Q7Z3D4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD3Q7Z3D4 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16■□□□□ 0.15
LYSMD3Q7Z3D4 AC100757.3-201ENST00000622361 1406 ntBASIC16■□□□□ 0.15
LYSMD3Q7Z3D4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms