Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 AC253536.4-201ENST00000440539 267 ntBASIC18.29■□□□□ 0.52
OTOP1Q7RTM1 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
OTOP1Q7RTM1 EIF4HP1-201ENST00000453115 687 ntBASIC18.29■□□□□ 0.52
OTOP1Q7RTM1 LDHBP1-201ENST00000455730 1119 ntBASIC18.29■□□□□ 0.52
OTOP1Q7RTM1 RERG-205ENST00000537647 935 ntTSL 2 BASIC18.29■□□□□ 0.52
OTOP1Q7RTM1 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
OTOP1Q7RTM1 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.29■□□□□ 0.52
OTOP1Q7RTM1 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC18.29■□□□□ 0.52
OTOP1Q7RTM1 CLUHP6-201ENST00000580789 941 ntBASIC18.29■□□□□ 0.52
OTOP1Q7RTM1 AL049840.4-201ENST00000602422 811 ntBASIC18.29■□□□□ 0.52
OTOP1Q7RTM1 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
OTOP1Q7RTM1 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.29■□□□□ 0.52
OTOP1Q7RTM1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
OTOP1Q7RTM1 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
OTOP1Q7RTM1 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
OTOP1Q7RTM1 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
OTOP1Q7RTM1 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
OTOP1Q7RTM1 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
OTOP1Q7RTM1 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.29■□□□□ 0.52
OTOP1Q7RTM1 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.29■□□□□ 0.52
OTOP1Q7RTM1 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.29■□□□□ 0.52
OTOP1Q7RTM1 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
OTOP1Q7RTM1 INTS4P2-202ENST00000614726 2019 ntBASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 AC005077.2-201ENST00000449786 690 ntBASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 UPF3AP2-201ENST00000457924 1132 ntBASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 CYP4F24P-201ENST00000586049 1580 ntBASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 AL136982.4-201ENST00000437689 1740 ntBASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
OTOP1Q7RTM1 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.27■□□□□ 0.52
OTOP1Q7RTM1 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
OTOP1Q7RTM1 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
OTOP1Q7RTM1 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
OTOP1Q7RTM1 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
OTOP1Q7RTM1 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.27■□□□□ 0.52
OTOP1Q7RTM1 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC18.27■□□□□ 0.52
OTOP1Q7RTM1 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.27■□□□□ 0.52
OTOP1Q7RTM1 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
OTOP1Q7RTM1 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
OTOP1Q7RTM1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
OTOP1Q7RTM1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
OTOP1Q7RTM1 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
OTOP1Q7RTM1 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.27■□□□□ 0.52
OTOP1Q7RTM1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
OTOP1Q7RTM1 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.27■□□□□ 0.52
OTOP1Q7RTM1 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
OTOP1Q7RTM1 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.27■□□□□ 0.52
OTOP1Q7RTM1 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
OTOP1Q7RTM1 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.27■□□□□ 0.52
OTOP1Q7RTM1 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
OTOP1Q7RTM1 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
OTOP1Q7RTM1 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
OTOP1Q7RTM1 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC18.27■□□□□ 0.52
OTOP1Q7RTM1 RPL13P2-201ENST00000440687 659 ntBASIC18.27■□□□□ 0.52
OTOP1Q7RTM1 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.27■□□□□ 0.52
OTOP1Q7RTM1 SCARNA20.5-201ENST00000516991 142 ntBASIC18.27■□□□□ 0.52
OTOP1Q7RTM1 FADS2-212ENST00000522639 360 ntTSL 5 BASIC18.27■□□□□ 0.52
OTOP1Q7RTM1 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC18.27■□□□□ 0.52
OTOP1Q7RTM1 FADS2-215ENST00000574708 385 ntTSL 3 BASIC18.27■□□□□ 0.52
OTOP1Q7RTM1 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
OTOP1Q7RTM1 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
OTOP1Q7RTM1 AC099398.1-201ENST00000567919 2776 ntBASIC18.27■□□□□ 0.51
OTOP1Q7RTM1 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.27■□□□□ 0.51
OTOP1Q7RTM1 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.27■□□□□ 0.51
OTOP1Q7RTM1 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.27■□□□□ 0.51
OTOP1Q7RTM1 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
OTOP1Q7RTM1 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
OTOP1Q7RTM1 AC138028.6-201ENST00000616106 1482 ntBASIC18.26■□□□□ 0.51
OTOP1Q7RTM1 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
OTOP1Q7RTM1 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.26■□□□□ 0.51
OTOP1Q7RTM1 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms