Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.31■□□□□ 0.2
CASC4Q6P4E1 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 AC099522.2-201ENST00000607001 744 ntBASIC16.31■□□□□ 0.2
CASC4Q6P4E1 BX640515.1-201ENST00000617215 977 ntBASIC16.31■□□□□ 0.2
CASC4Q6P4E1 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 AC103702.1-201ENST00000548801 2630 ntBASIC16.31■□□□□ 0.2
CASC4Q6P4E1 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CASC4Q6P4E1 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 PPT1-215ENST00000641471 2368 ntBASIC16.3■□□□□ 0.2
CASC4Q6P4E1 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 AC136621.1-201ENST00000624017 2304 ntBASIC16.3■□□□□ 0.2
CASC4Q6P4E1 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 FDX1P1-201ENST00000449115 551 ntBASIC16.3■□□□□ 0.2
CASC4Q6P4E1 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.3■□□□□ 0.2
CASC4Q6P4E1 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 SSR4P1-203ENST00000599569 2260 ntBASIC16.29■□□□□ 0.2
CASC4Q6P4E1 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 AC022532.1-201ENST00000624563 1728 ntBASIC16.29■□□□□ 0.2
CASC4Q6P4E1 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 GPX1P2-201ENST00000429271 606 ntBASIC16.29■□□□□ 0.2
CASC4Q6P4E1 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
CASC4Q6P4E1 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms