Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AC134684.3-201ENST00000641758 218 ntBASIC19.03■□□□□ 0.64
RNF20Q5VTR2 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF20Q5VTR2 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC19.03■□□□□ 0.64
RNF20Q5VTR2 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF20Q5VTR2 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC19.03■□□□□ 0.64
RNF20Q5VTR2 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF20Q5VTR2 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
RNF20Q5VTR2 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF20Q5VTR2 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF20Q5VTR2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF20Q5VTR2 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RNF20Q5VTR2 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC19.03■□□□□ 0.64
RNF20Q5VTR2 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC19.02■□□□□ 0.64
RNF20Q5VTR2 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.02■□□□□ 0.64
RNF20Q5VTR2 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF20Q5VTR2 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC19.02■□□□□ 0.64
RNF20Q5VTR2 AC092850.2-201ENST00000623821 2697 ntBASIC19.02■□□□□ 0.64
RNF20Q5VTR2 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF20Q5VTR2 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC19.02■□□□□ 0.64
RNF20Q5VTR2 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF20Q5VTR2 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF20Q5VTR2 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
RNF20Q5VTR2 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF20Q5VTR2 RBM39-205ENST00000397370 612 ntTSL 2 BASIC19.02■□□□□ 0.64
RNF20Q5VTR2 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
RNF20Q5VTR2 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.02■□□□□ 0.64
RNF20Q5VTR2 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.02■□□□□ 0.64
RNF20Q5VTR2 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.02■□□□□ 0.64
RNF20Q5VTR2 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.02■□□□□ 0.64
RNF20Q5VTR2 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC19.02■□□□□ 0.64
RNF20Q5VTR2 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.02■□□□□ 0.64
RNF20Q5VTR2 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF20Q5VTR2 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.02■□□□□ 0.64
RNF20Q5VTR2 AP001059.3-201ENST00000619053 235 ntBASIC19.02■□□□□ 0.64
RNF20Q5VTR2 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF20Q5VTR2 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
RNF20Q5VTR2 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RNF20Q5VTR2 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RNF20Q5VTR2 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
RNF20Q5VTR2 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RNF20Q5VTR2 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 AC022532.1-201ENST00000624563 1728 ntBASIC19.01■□□□□ 0.63
RNF20Q5VTR2 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 FXR1-221ENST00000491674 365 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 BANF1P1-201ENST00000553684 263 ntBASIC19.01■□□□□ 0.63
RNF20Q5VTR2 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 MIR4313-201ENST00000580760 101 ntBASIC19.01■□□□□ 0.63
RNF20Q5VTR2 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 MIR6080-201ENST00000617359 66 ntBASIC19.01■□□□□ 0.63
RNF20Q5VTR2 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.01■□□□□ 0.63
RNF20Q5VTR2 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 ILF3-AS1-201ENST00000591501 1983 ntBASIC19.01■□□□□ 0.63
RNF20Q5VTR2 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF20Q5VTR2 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF20Q5VTR2 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC19■□□□□ 0.63
RNF20Q5VTR2 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RNF20Q5VTR2 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF20Q5VTR2 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
RNF20Q5VTR2 MBP-202ENST00000355994 2772 ntTSL 5 BASIC19■□□□□ 0.63
RNF20Q5VTR2 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RNF20Q5VTR2 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF20Q5VTR2 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF20Q5VTR2 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RNF20Q5VTR2 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC19■□□□□ 0.63
RNF20Q5VTR2 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF20Q5VTR2 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC19■□□□□ 0.63
RNF20Q5VTR2 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms