Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TTC39BQ5VTQ0 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.62■□□□□ 0.25
TTC39BQ5VTQ0 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TTC39BQ5VTQ0 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TTC39BQ5VTQ0 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC39BQ5VTQ0 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.62■□□□□ 0.25
TTC39BQ5VTQ0 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC39BQ5VTQ0 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TTC39BQ5VTQ0 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.62■□□□□ 0.25
TTC39BQ5VTQ0 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TTC39BQ5VTQ0 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TTC39BQ5VTQ0 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TTC39BQ5VTQ0 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 AL080243.2-201ENST00000418783 582 ntBASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 SERBP1P3-201ENST00000459980 809 ntBASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 AC243562.2-201ENST00000561247 970 ntBASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC39BQ5VTQ0 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 AL096865.1-201ENST00000606796 927 ntBASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 TEX28P1-201ENST00000613479 1221 ntBASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 TEX28P2-201ENST00000617764 1221 ntBASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 KRT8P12-202ENST00000472924 1397 ntBASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 AC100757.3-201ENST00000622361 1406 ntBASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TTC39BQ5VTQ0 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC39BQ5VTQ0 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms