Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AL162726.2-201ENST00000438986 1017 ntBASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.99■□□□□ 0.31
CTC1Q2NKJ3 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTC1Q2NKJ3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.98■□□□□ 0.31
CTC1Q2NKJ3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTC1Q2NKJ3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CTC1Q2NKJ3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CTC1Q2NKJ3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.98■□□□□ 0.31
CTC1Q2NKJ3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.98■□□□□ 0.31
CTC1Q2NKJ3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.98■□□□□ 0.31
CTC1Q2NKJ3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CTC1Q2NKJ3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTC1Q2NKJ3 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.98■□□□□ 0.31
CTC1Q2NKJ3 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CTC1Q2NKJ3 FAM21FP-201ENST00000426241 1131 ntBASIC16.98■□□□□ 0.31
CTC1Q2NKJ3 RPL7P3-201ENST00000441388 714 ntBASIC16.98■□□□□ 0.31
CTC1Q2NKJ3 GOLGA2P4-201ENST00000441462 777 ntBASIC16.98■□□□□ 0.31
CTC1Q2NKJ3 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CTC1Q2NKJ3 AC099548.2-209ENST00000480264 625 ntBASIC16.98■□□□□ 0.31
CTC1Q2NKJ3 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.98■□□□□ 0.31
CTC1Q2NKJ3 AC020765.3-201ENST00000613051 740 ntBASIC16.98■□□□□ 0.31
CTC1Q2NKJ3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.98■□□□□ 0.31
CTC1Q2NKJ3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CTC1Q2NKJ3 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CTC1Q2NKJ3 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.98■□□□□ 0.31
CTC1Q2NKJ3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTC1Q2NKJ3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CTC1Q2NKJ3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
CTC1Q2NKJ3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.98■□□□□ 0.31
CTC1Q2NKJ3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTC1Q2NKJ3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTC1Q2NKJ3 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 AP000812.2-201ENST00000538934 718 ntBASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 AC133539.2-201ENST00000604757 467 ntBASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 CU634019.7-201ENST00000624153 1185 ntBASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 FP236241.2-201ENST00000624906 1185 ntBASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 AL139011.1-202ENST00000642063 584 ntBASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTC1Q2NKJ3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 HYMAI-201ENST00000635591 3347 ntBASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms