Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
KCNA1Q09470 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
KCNA1Q09470 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
KCNA1Q09470 AC074338.1-201ENST00000416825 156 ntBASIC17.47■□□□□ 0.39
KCNA1Q09470 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.47■□□□□ 0.39
KCNA1Q09470 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.47■□□□□ 0.39
KCNA1Q09470 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.47■□□□□ 0.39
KCNA1Q09470 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KCNA1Q09470 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KCNA1Q09470 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.47■□□□□ 0.39
KCNA1Q09470 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.47■□□□□ 0.39
KCNA1Q09470 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.47■□□□□ 0.39
KCNA1Q09470 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.47■□□□□ 0.39
KCNA1Q09470 AL390754.1-201ENST00000619088 582 ntBASIC17.47■□□□□ 0.39
KCNA1Q09470 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.47■□□□□ 0.39
KCNA1Q09470 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KCNA1Q09470 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KCNA1Q09470 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
KCNA1Q09470 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
KCNA1Q09470 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KCNA1Q09470 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KCNA1Q09470 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KCNA1Q09470 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
KCNA1Q09470 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KCNA1Q09470 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KCNA1Q09470 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KCNA1Q09470 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.47■□□□□ 0.39
KCNA1Q09470 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KCNA1Q09470 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
KCNA1Q09470 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
KCNA1Q09470 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.46■□□□□ 0.39
KCNA1Q09470 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.46■□□□□ 0.39
KCNA1Q09470 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
KCNA1Q09470 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.46■□□□□ 0.39
KCNA1Q09470 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
KCNA1Q09470 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
KCNA1Q09470 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KCNA1Q09470 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
KCNA1Q09470 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KCNA1Q09470 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KCNA1Q09470 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
KCNA1Q09470 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.46■□□□□ 0.39
KCNA1Q09470 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.46■□□□□ 0.39
KCNA1Q09470 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
KCNA1Q09470 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.46■□□□□ 0.39
KCNA1Q09470 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KCNA1Q09470 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.46■□□□□ 0.39
KCNA1Q09470 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KCNA1Q09470 AL162727.3-201ENST00000635661 2787 ntBASIC17.46■□□□□ 0.39
KCNA1Q09470 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KCNA1Q09470 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.46■□□□□ 0.39
KCNA1Q09470 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.46■□□□□ 0.39
KCNA1Q09470 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
KCNA1Q09470 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KCNA1Q09470 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KCNA1Q09470 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.38
KCNA1Q09470 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.46■□□□□ 0.38
KCNA1Q09470 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KCNA1Q09470 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KCNA1Q09470 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
KCNA1Q09470 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KCNA1Q09470 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
KCNA1Q09470 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
KCNA1Q09470 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
KCNA1Q09470 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
KCNA1Q09470 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KCNA1Q09470 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
KCNA1Q09470 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.45■□□□□ 0.38
KCNA1Q09470 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KCNA1Q09470 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KCNA1Q09470 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.45■□□□□ 0.38
KCNA1Q09470 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.45■□□□□ 0.38
KCNA1Q09470 AC136604.1-201ENST00000418535 575 ntBASIC17.45■□□□□ 0.38
KCNA1Q09470 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.45■□□□□ 0.38
KCNA1Q09470 TARDBPP1-201ENST00000442013 1203 ntBASIC17.45■□□□□ 0.38
KCNA1Q09470 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.45■□□□□ 0.38
KCNA1Q09470 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.45■□□□□ 0.38
KCNA1Q09470 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.45■□□□□ 0.38
KCNA1Q09470 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.45■□□□□ 0.38
KCNA1Q09470 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KCNA1Q09470 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.45■□□□□ 0.38
KCNA1Q09470 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.45■□□□□ 0.38
KCNA1Q09470 IGHV3-42-201ENST00000520410 361 ntBASIC17.45■□□□□ 0.38
KCNA1Q09470 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.45■□□□□ 0.38
KCNA1Q09470 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.45■□□□□ 0.38
KCNA1Q09470 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.45■□□□□ 0.38
KCNA1Q09470 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.45■□□□□ 0.38
KCNA1Q09470 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
KCNA1Q09470 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.45■□□□□ 0.38
KCNA1Q09470 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.45■□□□□ 0.38
KCNA1Q09470 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.45■□□□□ 0.38
KCNA1Q09470 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KCNA1Q09470 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.45■□□□□ 0.38
KCNA1Q09470 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
KCNA1Q09470 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KCNA1Q09470 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KCNA1Q09470 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.45■□□□□ 0.38
KCNA1Q09470 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
KCNA1Q09470 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KCNA1Q09470 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms