Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
HIST1H3AP68431 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H3AP68431 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H3AP68431 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H3AP68431 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H3AP68431 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H3AP68431 CICP13-201ENST00000422015 2789 ntBASIC13.92□□□□□ -0.18
HIST1H3AP68431 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
HIST1H3AP68431 SSR4P1-203ENST00000599569 2260 ntBASIC13.92□□□□□ -0.18
HIST1H3AP68431 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H3AP68431 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.92□□□□□ -0.18
HIST1H3AP68431 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
HIST1H3AP68431 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H3AP68431 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H3AP68431 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H3AP68431 FO393414.2-201ENST00000405153 598 ntBASIC13.92□□□□□ -0.18
HIST1H3AP68431 HIST3H2BA-201ENST00000436555 524 ntBASIC13.92□□□□□ -0.18
HIST1H3AP68431 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.92□□□□□ -0.18
HIST1H3AP68431 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.92□□□□□ -0.18
HIST1H3AP68431 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.92□□□□□ -0.18
HIST1H3AP68431 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.92□□□□□ -0.18
HIST1H3AP68431 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
HIST1H3AP68431 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HIST1H3AP68431 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H3AP68431 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.92□□□□□ -0.18
HIST1H3AP68431 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H3AP68431 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H3AP68431 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H3AP68431 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H3AP68431 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
HIST1H3AP68431 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
HIST1H3AP68431 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H3AP68431 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.92□□□□□ -0.18
HIST1H3AP68431 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H3AP68431 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
HIST1H3AP68431 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H3AP68431 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.92□□□□□ -0.18
HIST1H3AP68431 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H3AP68431 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H3AP68431 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.92□□□□□ -0.18
HIST1H3AP68431 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H3AP68431 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.92□□□□□ -0.18
HIST1H3AP68431 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
HIST1H3AP68431 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H3AP68431 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.92□□□□□ -0.18
HIST1H3AP68431 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H3AP68431 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H3AP68431 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
HIST1H3AP68431 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H3AP68431 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.92□□□□□ -0.18
HIST1H3AP68431 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.91□□□□□ -0.18
HIST1H3AP68431 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
HIST1H3AP68431 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H3AP68431 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H3AP68431 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
HIST1H3AP68431 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.91□□□□□ -0.18
HIST1H3AP68431 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.91□□□□□ -0.18
HIST1H3AP68431 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
HIST1H3AP68431 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H3AP68431 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.91□□□□□ -0.18
HIST1H3AP68431 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
HIST1H3AP68431 HYMAI-201ENST00000635591 3347 ntBASIC13.91□□□□□ -0.18
HIST1H3AP68431 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H3AP68431 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H3AP68431 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.91□□□□□ -0.18
HIST1H3AP68431 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.91□□□□□ -0.18
HIST1H3AP68431 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.91□□□□□ -0.18
HIST1H3AP68431 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H3AP68431 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H3AP68431 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H3AP68431 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.91□□□□□ -0.18
HIST1H3AP68431 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
HIST1H3AP68431 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H3AP68431 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
HIST1H3AP68431 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H3AP68431 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H3AP68431 AZGP1P1-201ENST00000411909 902 ntBASIC13.91□□□□□ -0.18
HIST1H3AP68431 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.91□□□□□ -0.18
HIST1H3AP68431 CNN2P11-201ENST00000429351 262 ntBASIC13.91□□□□□ -0.18
HIST1H3AP68431 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H3AP68431 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HIST1H3AP68431 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
HIST1H3AP68431 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H3AP68431 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.91□□□□□ -0.18
HIST1H3AP68431 AC003101.2-201ENST00000612557 442 ntBASIC13.91□□□□□ -0.18
HIST1H3AP68431 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.91□□□□□ -0.18
HIST1H3AP68431 AC134684.3-201ENST00000641758 218 ntBASIC13.91□□□□□ -0.18
HIST1H3AP68431 AC090616.6-203ENST00000579186 1945 ntBASIC13.91□□□□□ -0.18
HIST1H3AP68431 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H3AP68431 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H3AP68431 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H3AP68431 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H3AP68431 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.91□□□□□ -0.18
HIST1H3AP68431 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H3AP68431 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H3AP68431 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H3AP68431 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H3AP68431 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HIST1H3AP68431 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.91□□□□□ -0.18
HIST1H3AP68431 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms