Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBA52P62987 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBA52P62987 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBA52P62987 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBA52P62987 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UBA52P62987 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBA52P62987 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBA52P62987 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UBA52P62987 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.85□□□□□ -0.19
UBA52P62987 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UBA52P62987 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
UBA52P62987 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.85□□□□□ -0.19
UBA52P62987 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
UBA52P62987 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC13.85□□□□□ -0.19
UBA52P62987 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.85□□□□□ -0.19
UBA52P62987 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBA52P62987 AC004835.2-201ENST00000603762 682 ntBASIC13.85□□□□□ -0.19
UBA52P62987 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.85□□□□□ -0.19
UBA52P62987 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBA52P62987 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBA52P62987 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.85□□□□□ -0.19
UBA52P62987 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC13.85□□□□□ -0.19
UBA52P62987 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBA52P62987 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBA52P62987 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.85□□□□□ -0.19
UBA52P62987 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBA52P62987 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UBA52P62987 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
UBA52P62987 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBA52P62987 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBA52P62987 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC13.85□□□□□ -0.19
UBA52P62987 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBA52P62987 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBA52P62987 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBA52P62987 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBA52P62987 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBA52P62987 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC13.84□□□□□ -0.19
UBA52P62987 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.84□□□□□ -0.19
UBA52P62987 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBA52P62987 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBA52P62987 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBA52P62987 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.84□□□□□ -0.19
UBA52P62987 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBA52P62987 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBA52P62987 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBA52P62987 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBA52P62987 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.84□□□□□ -0.19
UBA52P62987 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBA52P62987 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBA52P62987 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
UBA52P62987 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.84□□□□□ -0.19
UBA52P62987 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
UBA52P62987 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.84□□□□□ -0.19
UBA52P62987 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.84□□□□□ -0.19
UBA52P62987 AC004449.1-201ENST00000564240 433 ntBASIC13.84□□□□□ -0.19
UBA52P62987 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.84□□□□□ -0.19
UBA52P62987 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.84□□□□□ -0.19
UBA52P62987 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBA52P62987 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
UBA52P62987 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBA52P62987 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC13.84□□□□□ -0.19
UBA52P62987 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.84□□□□□ -0.19
UBA52P62987 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
UBA52P62987 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
UBA52P62987 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
UBA52P62987 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBA52P62987 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBA52P62987 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.84□□□□□ -0.19
UBA52P62987 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBA52P62987 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBA52P62987 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
UBA52P62987 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC13.84□□□□□ -0.19
UBA52P62987 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBA52P62987 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBA52P62987 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBA52P62987 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBA52P62987 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.84□□□□□ -0.19
UBA52P62987 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
UBA52P62987 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
UBA52P62987 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
UBA52P62987 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
UBA52P62987 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
UBA52P62987 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
UBA52P62987 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UBA52P62987 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
UBA52P62987 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UBA52P62987 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UBA52P62987 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UBA52P62987 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UBA52P62987 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
UBA52P62987 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.83□□□□□ -0.2
UBA52P62987 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UBA52P62987 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.83□□□□□ -0.2
UBA52P62987 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBA52P62987 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBA52P62987 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
UBA52P62987 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UBA52P62987 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.83□□□□□ -0.2
UBA52P62987 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.83□□□□□ -0.2
UBA52P62987 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms