Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 AC008667.4-201ENST00000607370 168 ntBASIC13.92□□□□□ -0.18
CLDN12P56749 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC13.92□□□□□ -0.18
CLDN12P56749 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.92□□□□□ -0.18
CLDN12P56749 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN12P56749 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN12P56749 AGAP7P-201ENST00000582299 2062 ntBASIC13.92□□□□□ -0.18
CLDN12P56749 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN12P56749 AGAP14-201ENST00000624701 2060 ntBASIC13.92□□□□□ -0.18
CLDN12P56749 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN12P56749 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
CLDN12P56749 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN12P56749 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.92□□□□□ -0.18
CLDN12P56749 AC007292.2-201ENST00000593524 1812 ntBASIC13.92□□□□□ -0.18
CLDN12P56749 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.92□□□□□ -0.18
CLDN12P56749 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN12P56749 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN12P56749 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CLDN12P56749 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.91□□□□□ -0.18
CLDN12P56749 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN12P56749 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
CLDN12P56749 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN12P56749 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN12P56749 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN12P56749 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN12P56749 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN12P56749 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN12P56749 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CLDN12P56749 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CLDN12P56749 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN12P56749 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN12P56749 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.91□□□□□ -0.18
CLDN12P56749 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.91□□□□□ -0.18
CLDN12P56749 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CLDN12P56749 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN12P56749 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.91□□□□□ -0.18
CLDN12P56749 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN12P56749 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
CLDN12P56749 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CLDN12P56749 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.91□□□□□ -0.18
CLDN12P56749 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.91□□□□□ -0.18
CLDN12P56749 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN12P56749 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN12P56749 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CLDN12P56749 ACTL9-202ENST00000612068 1252 ntBASIC13.91□□□□□ -0.18
CLDN12P56749 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC13.91□□□□□ -0.18
CLDN12P56749 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN12P56749 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN12P56749 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN12P56749 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN12P56749 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.91□□□□□ -0.18
CLDN12P56749 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.91□□□□□ -0.18
CLDN12P56749 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN12P56749 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.91□□□□□ -0.18
CLDN12P56749 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN12P56749 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CLDN12P56749 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN12P56749 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CLDN12P56749 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN12P56749 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN12P56749 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN12P56749 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.91□□□□□ -0.18
CLDN12P56749 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
CLDN12P56749 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
CLDN12P56749 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN12P56749 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.91□□□□□ -0.18
CLDN12P56749 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.91□□□□□ -0.18
CLDN12P56749 LINC01101-201ENST00000622953 1884 ntBASIC13.91□□□□□ -0.18
CLDN12P56749 AC007326.2-201ENST00000624224 7579 ntBASIC13.9□□□□□ -0.18
CLDN12P56749 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN12P56749 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN12P56749 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.9□□□□□ -0.18
CLDN12P56749 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.9□□□□□ -0.18
CLDN12P56749 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN12P56749 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN12P56749 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN12P56749 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CLDN12P56749 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CLDN12P56749 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.9□□□□□ -0.18
CLDN12P56749 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN12P56749 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
CLDN12P56749 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN12P56749 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN12P56749 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.9□□□□□ -0.18
CLDN12P56749 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN12P56749 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.9□□□□□ -0.18
CLDN12P56749 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN12P56749 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CLDN12P56749 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN12P56749 AC117489.1-201ENST00000625169 3217 ntBASIC13.9□□□□□ -0.18
CLDN12P56749 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN12P56749 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN12P56749 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN12P56749 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.9□□□□□ -0.18
CLDN12P56749 KRT18P31-201ENST00000506277 1292 ntBASIC13.9□□□□□ -0.18
CLDN12P56749 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.9□□□□□ -0.18
CLDN12P56749 IGHV3-65-201ENST00000523210 341 ntBASIC13.9□□□□□ -0.18
CLDN12P56749 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
CLDN12P56749 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN12P56749 AP002469.2-201ENST00000531724 424 ntBASIC13.9□□□□□ -0.18
CLDN12P56749 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms