Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.16■□□□□ 0.02
CLDN8P56748 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.16■□□□□ 0.02
CLDN8P56748 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN8P56748 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CLDN8P56748 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.16■□□□□ 0.02
CLDN8P56748 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN8P56748 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN8P56748 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN8P56748 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.16■□□□□ 0.02
CLDN8P56748 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN8P56748 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN8P56748 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN8P56748 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN8P56748 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CLDN8P56748 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CLDN8P56748 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CLDN8P56748 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN8P56748 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CLDN8P56748 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN8P56748 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CLDN8P56748 KRT8P44-201ENST00000441609 1350 ntBASIC15.15■□□□□ 0.02
CLDN8P56748 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.15■□□□□ 0.02
CLDN8P56748 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN8P56748 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN8P56748 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN8P56748 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN8P56748 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN8P56748 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN8P56748 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CLDN8P56748 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN8P56748 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN8P56748 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.15■□□□□ 0.02
CLDN8P56748 SPDYE11-202ENST00000450699 704 ntBASIC15.15■□□□□ 0.02
CLDN8P56748 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN8P56748 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN8P56748 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.15■□□□□ 0.02
CLDN8P56748 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.15■□□□□ 0.02
CLDN8P56748 SPDYE9P-201ENST00000570642 692 ntBASIC15.15■□□□□ 0.02
CLDN8P56748 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.15■□□□□ 0.02
CLDN8P56748 AC120114.3-201ENST00000611923 658 ntBASIC15.15■□□□□ 0.02
CLDN8P56748 SPDYE10P-202ENST00000612005 668 ntBASIC15.15■□□□□ 0.02
CLDN8P56748 SPDYE8P-202ENST00000612377 668 ntBASIC15.15■□□□□ 0.02
CLDN8P56748 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.15■□□□□ 0.02
CLDN8P56748 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
CLDN8P56748 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
CLDN8P56748 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN8P56748 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN8P56748 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN8P56748 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN8P56748 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN8P56748 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN8P56748 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN8P56748 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN8P56748 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN8P56748 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN8P56748 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN8P56748 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CLDN8P56748 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN8P56748 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.15■□□□□ 0.02
CLDN8P56748 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN8P56748 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CLDN8P56748 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.15■□□□□ 0.02
CLDN8P56748 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
CLDN8P56748 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.14■□□□□ 0.01
CLDN8P56748 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN8P56748 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN8P56748 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.14■□□□□ 0.01
CLDN8P56748 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.14■□□□□ 0.01
CLDN8P56748 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CLDN8P56748 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN8P56748 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CLDN8P56748 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN8P56748 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN8P56748 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CLDN8P56748 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN8P56748 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN8P56748 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CLDN8P56748 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN8P56748 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN8P56748 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN8P56748 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN8P56748 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN8P56748 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN8P56748 AL645939.2-201ENST00000427340 991 ntBASIC15.14■□□□□ 0.01
CLDN8P56748 KRT8P48-201ENST00000515599 1220 ntBASIC15.14■□□□□ 0.01
CLDN8P56748 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN8P56748 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN8P56748 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN8P56748 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN8P56748 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN8P56748 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN8P56748 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN8P56748 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN8P56748 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.14■□□□□ 0.01
CLDN8P56748 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN8P56748 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN8P56748 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN8P56748 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.14■□□□□ 0.01
CLDN8P56748 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN8P56748 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms