Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.73■□□□□ 0.11
CDKN2DP55273 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2DP55273 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2DP55273 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2DP55273 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.73■□□□□ 0.11
CDKN2DP55273 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CDKN2DP55273 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2DP55273 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2DP55273 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2DP55273 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2DP55273 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.73■□□□□ 0.11
CDKN2DP55273 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.73■□□□□ 0.11
CDKN2DP55273 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CDKN2DP55273 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.73■□□□□ 0.11
CDKN2DP55273 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2DP55273 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2DP55273 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2DP55273 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.73■□□□□ 0.11
CDKN2DP55273 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2DP55273 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2DP55273 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.73■□□□□ 0.11
CDKN2DP55273 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CDKN2DP55273 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.72■□□□□ 0.11
CDKN2DP55273 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
CDKN2DP55273 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CDKN2DP55273 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDKN2DP55273 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.72■□□□□ 0.11
CDKN2DP55273 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.72■□□□□ 0.11
CDKN2DP55273 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDKN2DP55273 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CDKN2DP55273 AC011270.2-201ENST00000624293 2550 ntBASIC15.72■□□□□ 0.11
CDKN2DP55273 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.72■□□□□ 0.11
CDKN2DP55273 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDKN2DP55273 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.72■□□□□ 0.11
CDKN2DP55273 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDKN2DP55273 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDKN2DP55273 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CDKN2DP55273 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
CDKN2DP55273 AL353705.2-201ENST00000428243 662 ntBASIC15.72■□□□□ 0.11
CDKN2DP55273 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.72■□□□□ 0.11
CDKN2DP55273 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.72■□□□□ 0.11
CDKN2DP55273 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.72■□□□□ 0.11
CDKN2DP55273 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDKN2DP55273 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.72■□□□□ 0.11
CDKN2DP55273 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDKN2DP55273 AC004835.2-201ENST00000603762 682 ntBASIC15.72■□□□□ 0.11
CDKN2DP55273 AC003101.2-201ENST00000612557 442 ntBASIC15.72■□□□□ 0.11
CDKN2DP55273 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDKN2DP55273 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDKN2DP55273 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDKN2DP55273 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDKN2DP55273 AC023157.3-201ENST00000619086 2088 ntBASIC15.72■□□□□ 0.11
CDKN2DP55273 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDKN2DP55273 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.72■□□□□ 0.11
CDKN2DP55273 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.72■□□□□ 0.11
CDKN2DP55273 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.71■□□□□ 0.11
CDKN2DP55273 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKN2DP55273 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDKN2DP55273 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKN2DP55273 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKN2DP55273 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKN2DP55273 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKN2DP55273 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDKN2DP55273 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDKN2DP55273 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKN2DP55273 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKN2DP55273 AP002414.2-201ENST00000591780 3365 ntBASIC15.71■□□□□ 0.11
CDKN2DP55273 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDKN2DP55273 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKN2DP55273 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKN2DP55273 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKN2DP55273 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKN2DP55273 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDKN2DP55273 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.71■□□□□ 0.11
CDKN2DP55273 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKN2DP55273 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.71■□□□□ 0.11
CDKN2DP55273 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.71■□□□□ 0.11
CDKN2DP55273 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.71■□□□□ 0.11
CDKN2DP55273 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKN2DP55273 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.71■□□□□ 0.11
CDKN2DP55273 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.11
CDKN2DP55273 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.71■□□□□ 0.11
CDKN2DP55273 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.71■□□□□ 0.11
CDKN2DP55273 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.71■□□□□ 0.11
CDKN2DP55273 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.71■□□□□ 0.11
CDKN2DP55273 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.71■□□□□ 0.11
CDKN2DP55273 AC009093.7-201ENST00000623853 1223 ntBASIC15.71■□□□□ 0.11
CDKN2DP55273 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.71■□□□□ 0.11
CDKN2DP55273 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKN2DP55273 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKN2DP55273 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDKN2DP55273 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKN2DP55273 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.71■□□□□ 0.11
CDKN2DP55273 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDKN2DP55273 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDKN2DP55273 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
CDKN2DP55273 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.71■□□□□ 0.1
CDKN2DP55273 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDKN2DP55273 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDKN2DP55273 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms