Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.22■□□□□ 0.51
HMGCS2P54868 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCS2P54868 ACKR1-201ENST00000368121 1240 ntBASIC18.22■□□□□ 0.51
HMGCS2P54868 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC18.22■□□□□ 0.51
HMGCS2P54868 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCS2P54868 BCYRN1-201ENST00000418539 200 ntBASIC18.22■□□□□ 0.51
HMGCS2P54868 C2orf27AP3-201ENST00000434123 579 ntBASIC18.22■□□□□ 0.51
HMGCS2P54868 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCS2P54868 PFN1P12-201ENST00000455938 534 ntBASIC18.22■□□□□ 0.51
HMGCS2P54868 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC18.22■□□□□ 0.51
HMGCS2P54868 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCS2P54868 RIT1-205ENST00000539040 919 ntTSL 2 BASIC18.22■□□□□ 0.51
HMGCS2P54868 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.22■□□□□ 0.51
HMGCS2P54868 DERL2-202ENST00000570848 657 ntTSL 5 BASIC18.22■□□□□ 0.51
HMGCS2P54868 AC093813.1-201ENST00000605066 256 ntBASIC18.22■□□□□ 0.51
HMGCS2P54868 AL354718.3-201ENST00000616414 581 ntBASIC18.22■□□□□ 0.51
HMGCS2P54868 CR382287.1-201ENST00000623954 586 ntBASIC18.22■□□□□ 0.51
HMGCS2P54868 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCS2P54868 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCS2P54868 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
HMGCS2P54868 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
HMGCS2P54868 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCS2P54868 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC18.22■□□□□ 0.51
HMGCS2P54868 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCS2P54868 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
HMGCS2P54868 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCS2P54868 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.22■□□□□ 0.51
HMGCS2P54868 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCS2P54868 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.22■□□□□ 0.51
HMGCS2P54868 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
HMGCS2P54868 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCS2P54868 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCS2P54868 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCS2P54868 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCS2P54868 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCS2P54868 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.21■□□□□ 0.51
HMGCS2P54868 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCS2P54868 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCS2P54868 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCS2P54868 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCS2P54868 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.21■□□□□ 0.51
HMGCS2P54868 TPO-206ENST00000382269 1155 ntTSL 5 BASIC18.21■□□□□ 0.51
HMGCS2P54868 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCS2P54868 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC18.21■□□□□ 0.51
HMGCS2P54868 RN7SL560P-201ENST00000577943 264 ntBASIC18.21■□□□□ 0.51
HMGCS2P54868 AC015910.1-201ENST00000579400 975 ntBASIC18.21■□□□□ 0.51
HMGCS2P54868 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCS2P54868 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCS2P54868 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCS2P54868 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCS2P54868 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
HMGCS2P54868 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.21■□□□□ 0.51
HMGCS2P54868 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCS2P54868 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
HMGCS2P54868 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.21■□□□□ 0.51
HMGCS2P54868 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCS2P54868 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCS2P54868 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
HMGCS2P54868 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCS2P54868 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC18.21■□□□□ 0.51
HMGCS2P54868 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.21■□□□□ 0.5
HMGCS2P54868 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGCS2P54868 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
HMGCS2P54868 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.2■□□□□ 0.5
HMGCS2P54868 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGCS2P54868 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HMGCS2P54868 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
HMGCS2P54868 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HMGCS2P54868 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HMGCS2P54868 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGCS2P54868 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HMGCS2P54868 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
HMGCS2P54868 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HMGCS2P54868 OLR1-203ENST00000432556 950 ntTSL 2 BASIC18.2■□□□□ 0.5
HMGCS2P54868 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.2■□□□□ 0.5
HMGCS2P54868 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC18.2■□□□□ 0.5
HMGCS2P54868 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC18.2■□□□□ 0.5
HMGCS2P54868 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC18.2■□□□□ 0.5
HMGCS2P54868 KSR1-207ENST00000578981 748 ntTSL 4 BASIC18.2■□□□□ 0.5
HMGCS2P54868 AC243960.2-201ENST00000600996 747 ntBASIC18.2■□□□□ 0.5
HMGCS2P54868 AC084346.2-201ENST00000607097 949 ntBASIC18.2■□□□□ 0.5
HMGCS2P54868 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.2■□□□□ 0.5
HMGCS2P54868 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.2■□□□□ 0.5
HMGCS2P54868 AC008687.7-202ENST00000637404 953 ntBASIC18.2■□□□□ 0.5
HMGCS2P54868 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
HMGCS2P54868 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGCS2P54868 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.2■□□□□ 0.5
HMGCS2P54868 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.2■□□□□ 0.5
HMGCS2P54868 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGCS2P54868 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.2■□□□□ 0.5
HMGCS2P54868 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
HMGCS2P54868 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCS2P54868 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.19■□□□□ 0.5
HMGCS2P54868 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCS2P54868 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
HMGCS2P54868 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCS2P54868 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCS2P54868 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCS2P54868 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.19■□□□□ 0.5
HMGCS2P54868 CNN2P8-201ENST00000421872 913 ntBASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms