Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
PDE1AP54750 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.7
PDE1AP54750 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PDE1AP54750 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
PDE1AP54750 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDE1AP54750 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDE1AP54750 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDE1AP54750 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PDE1AP54750 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDE1AP54750 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDE1AP54750 AC074338.1-201ENST00000416825 156 ntBASIC19.39■□□□□ 0.69
PDE1AP54750 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC19.39■□□□□ 0.69
PDE1AP54750 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC19.39■□□□□ 0.69
PDE1AP54750 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC19.39■□□□□ 0.69
PDE1AP54750 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDE1AP54750 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.39■□□□□ 0.69
PDE1AP54750 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.39■□□□□ 0.69
PDE1AP54750 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC19.39■□□□□ 0.69
PDE1AP54750 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC19.39■□□□□ 0.69
PDE1AP54750 TEX28P1-201ENST00000613479 1221 ntBASIC19.39■□□□□ 0.69
PDE1AP54750 TEX28P2-201ENST00000617764 1221 ntBASIC19.39■□□□□ 0.69
PDE1AP54750 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PDE1AP54750 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PDE1AP54750 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDE1AP54750 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDE1AP54750 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDE1AP54750 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC19.39■□□□□ 0.69
PDE1AP54750 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDE1AP54750 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDE1AP54750 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.39■□□□□ 0.69
PDE1AP54750 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC19.39■□□□□ 0.69
PDE1AP54750 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDE1AP54750 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDE1AP54750 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDE1AP54750 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC19.39■□□□□ 0.69
PDE1AP54750 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDE1AP54750 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDE1AP54750 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDE1AP54750 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDE1AP54750 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDE1AP54750 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDE1AP54750 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC19.38■□□□□ 0.69
PDE1AP54750 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDE1AP54750 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDE1AP54750 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDE1AP54750 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
PDE1AP54750 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDE1AP54750 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC19.38■□□□□ 0.69
PDE1AP54750 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC19.38■□□□□ 0.69
PDE1AP54750 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDE1AP54750 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDE1AP54750 KLF2P3-201ENST00000451977 1087 ntBASIC19.38■□□□□ 0.69
PDE1AP54750 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.38■□□□□ 0.69
PDE1AP54750 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC19.38■□□□□ 0.69
PDE1AP54750 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC19.38■□□□□ 0.69
PDE1AP54750 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDE1AP54750 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC19.38■□□□□ 0.69
PDE1AP54750 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.38■□□□□ 0.69
PDE1AP54750 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDE1AP54750 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC19.38■□□□□ 0.69
PDE1AP54750 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDE1AP54750 FO538757.1-201ENST00000623083 1397 ntBASIC19.38■□□□□ 0.69
PDE1AP54750 AC112693.3-201ENST00000624819 1983 ntBASIC19.38■□□□□ 0.69
PDE1AP54750 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC19.38■□□□□ 0.69
PDE1AP54750 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.38■□□□□ 0.69
PDE1AP54750 AL033527.5-202ENST00000641632 1098 ntBASIC19.38■□□□□ 0.69
PDE1AP54750 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDE1AP54750 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PDE1AP54750 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
PDE1AP54750 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE1AP54750 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDE1AP54750 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE1AP54750 STK33-217ENST00000534493 1895 ntTSL 2 BASIC19.37■□□□□ 0.69
PDE1AP54750 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC19.37■□□□□ 0.69
PDE1AP54750 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDE1AP54750 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC19.37■□□□□ 0.69
PDE1AP54750 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDE1AP54750 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDE1AP54750 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDE1AP54750 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE1AP54750 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE1AP54750 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDE1AP54750 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.37■□□□□ 0.69
PDE1AP54750 AC125807.1-201ENST00000483097 614 ntBASIC19.37■□□□□ 0.69
PDE1AP54750 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC19.37■□□□□ 0.69
PDE1AP54750 AL512361.1-201ENST00000554200 418 ntBASIC19.37■□□□□ 0.69
PDE1AP54750 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.37■□□□□ 0.69
PDE1AP54750 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE1AP54750 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC19.37■□□□□ 0.69
PDE1AP54750 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PDE1AP54750 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE1AP54750 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE1AP54750 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE1AP54750 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PDE1AP54750 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDE1AP54750 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE1AP54750 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PDE1AP54750 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDE1AP54750 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PDE1AP54750 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms