Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NEK3P51956 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NEK3P51956 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NEK3P51956 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NEK3P51956 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NEK3P51956 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NEK3P51956 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NEK3P51956 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NEK3P51956 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.46■□□□□ 0.23
NEK3P51956 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.46■□□□□ 0.23
NEK3P51956 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.46■□□□□ 0.23
NEK3P51956 BASP1P1-201ENST00000430708 665 ntBASIC16.46■□□□□ 0.23
NEK3P51956 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.46■□□□□ 0.23
NEK3P51956 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.46■□□□□ 0.23
NEK3P51956 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.46■□□□□ 0.23
NEK3P51956 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
NEK3P51956 BCRP1-201ENST00000444246 691 ntBASIC16.46■□□□□ 0.23
NEK3P51956 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.46■□□□□ 0.23
NEK3P51956 RNA5SP421-201ENST00000516864 134 ntBASIC16.46■□□□□ 0.23
NEK3P51956 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.46■□□□□ 0.23
NEK3P51956 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
NEK3P51956 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
NEK3P51956 AL096865.1-201ENST00000606796 927 ntBASIC16.46■□□□□ 0.23
NEK3P51956 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.46■□□□□ 0.23
NEK3P51956 FO538757.1-201ENST00000623083 1397 ntBASIC16.46■□□□□ 0.23
NEK3P51956 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
NEK3P51956 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.46■□□□□ 0.23
NEK3P51956 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NEK3P51956 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NEK3P51956 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.46■□□□□ 0.23
NEK3P51956 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NEK3P51956 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
NEK3P51956 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NEK3P51956 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NEK3P51956 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
NEK3P51956 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NEK3P51956 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEK3P51956 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
NEK3P51956 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEK3P51956 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.45■□□□□ 0.22
NEK3P51956 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.45■□□□□ 0.22
NEK3P51956 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEK3P51956 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.45■□□□□ 0.22
NEK3P51956 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NEK3P51956 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.45■□□□□ 0.22
NEK3P51956 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
NEK3P51956 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NEK3P51956 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEK3P51956 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.45■□□□□ 0.22
NEK3P51956 FAM8A3P-201ENST00000427218 844 ntBASIC16.45■□□□□ 0.22
NEK3P51956 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.45■□□□□ 0.22
NEK3P51956 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.45■□□□□ 0.22
NEK3P51956 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.45■□□□□ 0.22
NEK3P51956 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.45■□□□□ 0.22
NEK3P51956 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.45■□□□□ 0.22
NEK3P51956 AC092364.2-202ENST00000597012 1073 ntBASIC16.45■□□□□ 0.22
NEK3P51956 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.45■□□□□ 0.22
NEK3P51956 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.45■□□□□ 0.22
NEK3P51956 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEK3P51956 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEK3P51956 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEK3P51956 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NEK3P51956 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
NEK3P51956 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
NEK3P51956 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEK3P51956 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEK3P51956 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
NEK3P51956 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.45■□□□□ 0.22
NEK3P51956 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.45■□□□□ 0.22
NEK3P51956 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
NEK3P51956 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEK3P51956 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
NEK3P51956 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.44■□□□□ 0.22
NEK3P51956 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.44■□□□□ 0.22
NEK3P51956 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NEK3P51956 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
NEK3P51956 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEK3P51956 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEK3P51956 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.44■□□□□ 0.22
NEK3P51956 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.44■□□□□ 0.22
NEK3P51956 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEK3P51956 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEK3P51956 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.44■□□□□ 0.22
NEK3P51956 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEK3P51956 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEK3P51956 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
NEK3P51956 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.44■□□□□ 0.22
NEK3P51956 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEK3P51956 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
NEK3P51956 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.44■□□□□ 0.22
NEK3P51956 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEK3P51956 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.44■□□□□ 0.22
NEK3P51956 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NEK3P51956 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.44■□□□□ 0.22
NEK3P51956 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
NEK3P51956 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NEK3P51956 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEK3P51956 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NEK3P51956 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEK3P51956 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms