Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CENPAP49450 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CENPAP49450 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CENPAP49450 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CENPAP49450 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.54□□□□□ -0.08
CENPAP49450 AC004877.2-201ENST00000623941 599 ntBASIC14.54□□□□□ -0.08
CENPAP49450 HLA-A-201ENST00000376802 1334 ntBASIC14.54□□□□□ -0.08
CENPAP49450 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.54□□□□□ -0.08
CENPAP49450 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CENPAP49450 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CENPAP49450 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.54□□□□□ -0.08
CENPAP49450 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CENPAP49450 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.54□□□□□ -0.08
CENPAP49450 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CENPAP49450 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CENPAP49450 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CENPAP49450 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.54□□□□□ -0.08
CENPAP49450 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CENPAP49450 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CENPAP49450 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CENPAP49450 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CENPAP49450 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CENPAP49450 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.53□□□□□ -0.08
CENPAP49450 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CENPAP49450 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CENPAP49450 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
CENPAP49450 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CENPAP49450 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CENPAP49450 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.53□□□□□ -0.08
CENPAP49450 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CENPAP49450 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.53□□□□□ -0.08
CENPAP49450 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CENPAP49450 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CENPAP49450 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.53□□□□□ -0.08
CENPAP49450 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CENPAP49450 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.53□□□□□ -0.08
CENPAP49450 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CENPAP49450 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.53□□□□□ -0.08
CENPAP49450 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CENPAP49450 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CENPAP49450 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.53□□□□□ -0.08
CENPAP49450 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CENPAP49450 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.53□□□□□ -0.08
CENPAP49450 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CENPAP49450 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
CENPAP49450 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.53□□□□□ -0.08
CENPAP49450 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.53□□□□□ -0.08
CENPAP49450 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.53□□□□□ -0.08
CENPAP49450 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.53□□□□□ -0.08
CENPAP49450 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.53□□□□□ -0.08
CENPAP49450 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.53□□□□□ -0.08
CENPAP49450 AL009183.1-201ENST00000603760 355 ntBASIC14.53□□□□□ -0.08
CENPAP49450 AC064836.3-201ENST00000607928 673 ntBASIC14.53□□□□□ -0.08
CENPAP49450 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.53□□□□□ -0.08
CENPAP49450 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.53□□□□□ -0.08
CENPAP49450 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CENPAP49450 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.53□□□□□ -0.08
CENPAP49450 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CENPAP49450 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
CENPAP49450 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CENPAP49450 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CENPAP49450 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CENPAP49450 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CENPAP49450 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CENPAP49450 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.53□□□□□ -0.08
CENPAP49450 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CENPAP49450 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CENPAP49450 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CENPAP49450 DBET-201ENST00000630918 3363 ntBASIC14.53□□□□□ -0.08
CENPAP49450 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CENPAP49450 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CENPAP49450 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CENPAP49450 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CENPAP49450 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.53□□□□□ -0.08
CENPAP49450 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CENPAP49450 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
CENPAP49450 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CENPAP49450 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CENPAP49450 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CENPAP49450 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.52□□□□□ -0.08
CENPAP49450 AC092919.2-201ENST00000623631 1645 ntBASIC14.52□□□□□ -0.08
CENPAP49450 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CENPAP49450 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CENPAP49450 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CENPAP49450 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CENPAP49450 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CENPAP49450 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CENPAP49450 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CENPAP49450 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CENPAP49450 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CENPAP49450 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CENPAP49450 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CENPAP49450 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CENPAP49450 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.52□□□□□ -0.08
CENPAP49450 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CENPAP49450 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CENPAP49450 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CENPAP49450 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CENPAP49450 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CENPAP49450 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms