Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SOX2P48431 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SOX2P48431 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SOX2P48431 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.09□□□□□ -0.15
SOX2P48431 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SOX2P48431 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SOX2P48431 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SOX2P48431 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.09□□□□□ -0.15
SOX2P48431 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SOX2P48431 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SOX2P48431 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.09□□□□□ -0.15
SOX2P48431 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SOX2P48431 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.09□□□□□ -0.15
SOX2P48431 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.09□□□□□ -0.15
SOX2P48431 TP73-AS1-207ENST00000624167 988 ntBASIC14.09□□□□□ -0.15
SOX2P48431 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SOX2P48431 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SOX2P48431 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SOX2P48431 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.09□□□□□ -0.15
SOX2P48431 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.09□□□□□ -0.15
SOX2P48431 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SOX2P48431 AC090616.6-203ENST00000579186 1945 ntBASIC14.09□□□□□ -0.15
SOX2P48431 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SOX2P48431 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SOX2P48431 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SOX2P48431 AC134407.2-201ENST00000625089 1978 ntBASIC14.09□□□□□ -0.15
SOX2P48431 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SOX2P48431 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SOX2P48431 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SOX2P48431 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.09□□□□□ -0.15
SOX2P48431 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SOX2P48431 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SOX2P48431 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SOX2P48431 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
SOX2P48431 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
SOX2P48431 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
SOX2P48431 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SOX2P48431 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SOX2P48431 AC105250.1-201ENST00000509378 2057 ntBASIC14.08□□□□□ -0.15
SOX2P48431 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SOX2P48431 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.08□□□□□ -0.15
SOX2P48431 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.08□□□□□ -0.15
SOX2P48431 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.08□□□□□ -0.15
SOX2P48431 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
SOX2P48431 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SOX2P48431 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.08□□□□□ -0.16
SOX2P48431 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SOX2P48431 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SOX2P48431 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SOX2P48431 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SOX2P48431 AC007686.3-201ENST00000619017 3487 ntBASIC14.08□□□□□ -0.16
SOX2P48431 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SOX2P48431 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SOX2P48431 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SOX2P48431 AC106881.1-201ENST00000605849 3329 ntBASIC14.08□□□□□ -0.16
SOX2P48431 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.08□□□□□ -0.16
SOX2P48431 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
SOX2P48431 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SOX2P48431 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.08□□□□□ -0.16
SOX2P48431 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
SOX2P48431 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
SOX2P48431 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.08□□□□□ -0.16
SOX2P48431 FAM197Y8-203ENST00000450145 560 ntBASIC14.08□□□□□ -0.16
SOX2P48431 KRT18P34-201ENST00000488218 1270 ntBASIC14.08□□□□□ -0.16
SOX2P48431 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14.08□□□□□ -0.16
SOX2P48431 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.08□□□□□ -0.16
SOX2P48431 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SOX2P48431 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.08□□□□□ -0.16
SOX2P48431 AL365330.1-201ENST00000607459 531 ntBASIC14.08□□□□□ -0.16
SOX2P48431 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.08□□□□□ -0.16
SOX2P48431 AC117500.6-201ENST00000624871 588 ntBASIC14.08□□□□□ -0.16
SOX2P48431 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.08□□□□□ -0.16
SOX2P48431 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SOX2P48431 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SOX2P48431 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.08□□□□□ -0.16
SOX2P48431 AC091951.1-201ENST00000512854 2465 ntBASIC14.08□□□□□ -0.16
SOX2P48431 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SOX2P48431 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SOX2P48431 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SOX2P48431 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
SOX2P48431 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SOX2P48431 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.08□□□□□ -0.16
SOX2P48431 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
SOX2P48431 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.08□□□□□ -0.16
SOX2P48431 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.08□□□□□ -0.16
SOX2P48431 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.08□□□□□ -0.16
SOX2P48431 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SOX2P48431 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SOX2P48431 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SOX2P48431 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SOX2P48431 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.08□□□□□ -0.16
SOX2P48431 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SOX2P48431 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SOX2P48431 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SOX2P48431 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.07□□□□□ -0.16
SOX2P48431 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.07□□□□□ -0.16
SOX2P48431 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.07□□□□□ -0.16
SOX2P48431 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SOX2P48431 AL009178.2-201ENST00000597278 2719 ntBASIC14.07□□□□□ -0.16
SOX2P48431 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms