Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCLP35914 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.82■□□□□ 0.12
HMGCLP35914 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCLP35914 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCLP35914 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCLP35914 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCLP35914 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCLP35914 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCLP35914 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.82■□□□□ 0.12
HMGCLP35914 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.82■□□□□ 0.12
HMGCLP35914 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
HMGCLP35914 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMGCLP35914 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HMGCLP35914 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMGCLP35914 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HMGCLP35914 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.81■□□□□ 0.12
HMGCLP35914 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HMGCLP35914 MIR770-201ENST00000390219 98 ntBASIC15.81■□□□□ 0.12
HMGCLP35914 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMGCLP35914 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HMGCLP35914 AC074338.1-201ENST00000416825 156 ntBASIC15.81■□□□□ 0.12
HMGCLP35914 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.81■□□□□ 0.12
HMGCLP35914 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HMGCLP35914 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.81■□□□□ 0.12
HMGCLP35914 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.81■□□□□ 0.12
HMGCLP35914 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMGCLP35914 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.81■□□□□ 0.12
HMGCLP35914 AL512638.1-201ENST00000457493 794 ntBASIC15.81■□□□□ 0.12
HMGCLP35914 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
HMGCLP35914 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HMGCLP35914 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.81■□□□□ 0.12
HMGCLP35914 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.81■□□□□ 0.12
HMGCLP35914 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.81■□□□□ 0.12
HMGCLP35914 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.81■□□□□ 0.12
HMGCLP35914 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMGCLP35914 AC009407.1-201ENST00000568958 598 ntBASIC15.81■□□□□ 0.12
HMGCLP35914 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.81■□□□□ 0.12
HMGCLP35914 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.81■□□□□ 0.12
HMGCLP35914 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.81■□□□□ 0.12
HMGCLP35914 AC022144.1-201ENST00000602255 1580 ntBASIC15.81■□□□□ 0.12
HMGCLP35914 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.81■□□□□ 0.12
HMGCLP35914 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMGCLP35914 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.81■□□□□ 0.12
HMGCLP35914 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMGCLP35914 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMGCLP35914 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HMGCLP35914 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMGCLP35914 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMGCLP35914 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMGCLP35914 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.81■□□□□ 0.12
HMGCLP35914 AC105917.1-201ENST00000506637 2539 ntBASIC15.81■□□□□ 0.12
HMGCLP35914 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.8■□□□□ 0.12
HMGCLP35914 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.8■□□□□ 0.12
HMGCLP35914 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
HMGCLP35914 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGCLP35914 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGCLP35914 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGCLP35914 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGCLP35914 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.8■□□□□ 0.12
HMGCLP35914 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.8■□□□□ 0.12
HMGCLP35914 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGCLP35914 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.8■□□□□ 0.12
HMGCLP35914 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HMGCLP35914 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.8■□□□□ 0.12
HMGCLP35914 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGCLP35914 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGCLP35914 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGCLP35914 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGCLP35914 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
HMGCLP35914 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGCLP35914 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGCLP35914 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.8■□□□□ 0.12
HMGCLP35914 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGCLP35914 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.8■□□□□ 0.12
HMGCLP35914 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGCLP35914 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
HMGCLP35914 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGCLP35914 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.8■□□□□ 0.12
HMGCLP35914 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGCLP35914 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.8■□□□□ 0.12
HMGCLP35914 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.8■□□□□ 0.12
HMGCLP35914 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.8■□□□□ 0.12
HMGCLP35914 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.8■□□□□ 0.12
HMGCLP35914 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.8■□□□□ 0.12
HMGCLP35914 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.8■□□□□ 0.12
HMGCLP35914 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.8■□□□□ 0.12
HMGCLP35914 AC044860.1-202ENST00000559481 777 ntBASIC15.8■□□□□ 0.12
HMGCLP35914 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
HMGCLP35914 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.8■□□□□ 0.12
HMGCLP35914 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.8■□□□□ 0.12
HMGCLP35914 AL109936.8-201ENST00000641772 604 ntBASIC15.8■□□□□ 0.12
HMGCLP35914 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGCLP35914 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HMGCLP35914 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HMGCLP35914 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HMGCLP35914 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HMGCLP35914 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGCLP35914 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.8■□□□□ 0.12
HMGCLP35914 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.8■□□□□ 0.12
HMGCLP35914 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms