Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RFC1P35251 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFC1P35251 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.82■□□□□ 0.28
RFC1P35251 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.82■□□□□ 0.28
RFC1P35251 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFC1P35251 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RFC1P35251 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFC1P35251 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFC1P35251 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.81■□□□□ 0.28
RFC1P35251 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFC1P35251 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFC1P35251 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFC1P35251 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFC1P35251 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.81■□□□□ 0.28
RFC1P35251 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RFC1P35251 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RFC1P35251 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFC1P35251 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFC1P35251 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFC1P35251 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFC1P35251 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFC1P35251 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFC1P35251 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.81■□□□□ 0.28
RFC1P35251 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.81■□□□□ 0.28
RFC1P35251 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.81■□□□□ 0.28
RFC1P35251 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFC1P35251 SNHG9-202ENST00000564014 471 ntBASIC16.81■□□□□ 0.28
RFC1P35251 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.81■□□□□ 0.28
RFC1P35251 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.81■□□□□ 0.28
RFC1P35251 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.81■□□□□ 0.28
RFC1P35251 AC026979.3-201ENST00000607315 403 ntBASIC16.81■□□□□ 0.28
RFC1P35251 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.81■□□□□ 0.28
RFC1P35251 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFC1P35251 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFC1P35251 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFC1P35251 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFC1P35251 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.81■□□□□ 0.28
RFC1P35251 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFC1P35251 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFC1P35251 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFC1P35251 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFC1P35251 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
RFC1P35251 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFC1P35251 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFC1P35251 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RFC1P35251 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFC1P35251 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.8■□□□□ 0.28
RFC1P35251 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFC1P35251 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.8■□□□□ 0.28
RFC1P35251 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFC1P35251 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFC1P35251 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
RFC1P35251 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.8■□□□□ 0.28
RFC1P35251 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RFC1P35251 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RFC1P35251 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RFC1P35251 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RFC1P35251 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RFC1P35251 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFC1P35251 MIR1233-2-201ENST00000408138 82 ntBASIC16.8■□□□□ 0.28
RFC1P35251 MIR1233-1-201ENST00000408722 82 ntBASIC16.8■□□□□ 0.28
RFC1P35251 AL353705.2-201ENST00000428243 662 ntBASIC16.8■□□□□ 0.28
RFC1P35251 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.8■□□□□ 0.28
RFC1P35251 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.8■□□□□ 0.28
RFC1P35251 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFC1P35251 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.8■□□□□ 0.28
RFC1P35251 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RFC1P35251 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFC1P35251 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.8■□□□□ 0.28
RFC1P35251 AC105021.1-202ENST00000570572 669 ntBASIC16.8■□□□□ 0.28
RFC1P35251 AC003101.2-201ENST00000612557 442 ntBASIC16.8■□□□□ 0.28
RFC1P35251 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFC1P35251 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFC1P35251 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RFC1P35251 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFC1P35251 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.8■□□□□ 0.28
RFC1P35251 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFC1P35251 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.8■□□□□ 0.28
RFC1P35251 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RFC1P35251 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFC1P35251 AC092850.2-201ENST00000623821 2697 ntBASIC16.8■□□□□ 0.28
RFC1P35251 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFC1P35251 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RFC1P35251 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
RFC1P35251 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RFC1P35251 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFC1P35251 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFC1P35251 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.79■□□□□ 0.28
RFC1P35251 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.79■□□□□ 0.28
RFC1P35251 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFC1P35251 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFC1P35251 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.79■□□□□ 0.28
RFC1P35251 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.79■□□□□ 0.28
RFC1P35251 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.79■□□□□ 0.28
RFC1P35251 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.79■□□□□ 0.28
RFC1P35251 AP001059.3-201ENST00000619053 235 ntBASIC16.79■□□□□ 0.28
RFC1P35251 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.79■□□□□ 0.28
RFC1P35251 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RFC1P35251 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFC1P35251 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms