Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
CCKBRP32239 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.28■□□□□ 0.04
CCKBRP32239 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCKBRP32239 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCKBRP32239 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.28■□□□□ 0.04
CCKBRP32239 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCKBRP32239 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.28■□□□□ 0.04
CCKBRP32239 RPL13P2-201ENST00000440687 659 ntBASIC15.28■□□□□ 0.04
CCKBRP32239 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.28■□□□□ 0.04
CCKBRP32239 KRT223P-202ENST00000449164 1292 ntBASIC15.28■□□□□ 0.04
CCKBRP32239 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.28■□□□□ 0.04
CCKBRP32239 AC022494.1-201ENST00000466044 728 ntBASIC15.28■□□□□ 0.04
CCKBRP32239 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.28■□□□□ 0.04
CCKBRP32239 AC119751.2-201ENST00000504529 210 ntBASIC15.28■□□□□ 0.04
CCKBRP32239 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.28■□□□□ 0.04
CCKBRP32239 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.28■□□□□ 0.04
CCKBRP32239 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CCKBRP32239 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.28■□□□□ 0.04
CCKBRP32239 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.28■□□□□ 0.04
CCKBRP32239 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.28■□□□□ 0.04
CCKBRP32239 LINC01115-203ENST00000606068 577 ntBASIC15.28■□□□□ 0.04
CCKBRP32239 AC133552.6-201ENST00000613406 534 ntBASIC15.28■□□□□ 0.04
CCKBRP32239 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CCKBRP32239 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.28■□□□□ 0.04
CCKBRP32239 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.28■□□□□ 0.04
CCKBRP32239 COX11-210ENST00000639671 696 ntBASIC15.28■□□□□ 0.04
CCKBRP32239 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCKBRP32239 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCKBRP32239 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCKBRP32239 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.28■□□□□ 0.04
CCKBRP32239 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
CCKBRP32239 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.28■□□□□ 0.04
CCKBRP32239 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.28■□□□□ 0.04
CCKBRP32239 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCKBRP32239 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCKBRP32239 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.28■□□□□ 0.04
CCKBRP32239 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.28■□□□□ 0.04
CCKBRP32239 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CCKBRP32239 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCKBRP32239 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.28■□□□□ 0.04
CCKBRP32239 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCKBRP32239 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCKBRP32239 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCKBRP32239 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCKBRP32239 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCKBRP32239 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCKBRP32239 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.28■□□□□ 0.04
CCKBRP32239 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCKBRP32239 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CCKBRP32239 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.27■□□□□ 0.04
CCKBRP32239 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCKBRP32239 KRT8P37-201ENST00000451609 1420 ntBASIC15.27■□□□□ 0.04
CCKBRP32239 PCDHB19P-201ENST00000570871 2371 ntBASIC15.27■□□□□ 0.04
CCKBRP32239 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.27■□□□□ 0.04
CCKBRP32239 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCKBRP32239 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CCKBRP32239 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCKBRP32239 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCKBRP32239 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
CCKBRP32239 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.27■□□□□ 0.04
CCKBRP32239 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCKBRP32239 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCKBRP32239 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCKBRP32239 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CCKBRP32239 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCKBRP32239 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCKBRP32239 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.27■□□□□ 0.04
CCKBRP32239 KRT43P-201ENST00000434019 910 ntBASIC15.27■□□□□ 0.04
CCKBRP32239 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.27■□□□□ 0.04
CCKBRP32239 AL162726.2-201ENST00000438986 1017 ntBASIC15.27■□□□□ 0.04
CCKBRP32239 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.27■□□□□ 0.04
CCKBRP32239 BTNL10-201ENST00000595971 695 ntBASIC15.27■□□□□ 0.04
CCKBRP32239 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.27■□□□□ 0.04
CCKBRP32239 AL158212.4-201ENST00000624062 1286 ntBASIC15.27■□□□□ 0.04
CCKBRP32239 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCKBRP32239 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCKBRP32239 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCKBRP32239 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCKBRP32239 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCKBRP32239 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCKBRP32239 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCKBRP32239 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCKBRP32239 AL592424.1-201ENST00000563624 1536 ntBASIC15.27■□□□□ 0.03
CCKBRP32239 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
CCKBRP32239 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CCKBRP32239 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCKBRP32239 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CCKBRP32239 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCKBRP32239 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CCKBRP32239 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCKBRP32239 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCKBRP32239 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCKBRP32239 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCKBRP32239 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.26■□□□□ 0.03
CCKBRP32239 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.26■□□□□ 0.03
CCKBRP32239 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCKBRP32239 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.26■□□□□ 0.03
CCKBRP32239 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.26■□□□□ 0.03
CCKBRP32239 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCKBRP32239 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms