Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC19.27■□□□□ 0.68
CHRNA5P30532 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.27■□□□□ 0.68
CHRNA5P30532 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CHRNA5P30532 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA5P30532 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA5P30532 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CHRNA5P30532 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC19.27■□□□□ 0.68
CHRNA5P30532 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA5P30532 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC19.27■□□□□ 0.68
CHRNA5P30532 SERPINA13P-202ENST00000478994 924 ntBASIC19.27■□□□□ 0.68
CHRNA5P30532 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CHRNA5P30532 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA5P30532 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CHRNA5P30532 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA5P30532 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC19.27■□□□□ 0.68
CHRNA5P30532 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CHRNA5P30532 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC19.27■□□□□ 0.68
CHRNA5P30532 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA5P30532 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA5P30532 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CHRNA5P30532 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA5P30532 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
CHRNA5P30532 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA5P30532 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHRNA5P30532 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHRNA5P30532 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CHRNA5P30532 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CHRNA5P30532 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CHRNA5P30532 AC148477.4-201ENST00000613430 1793 ntBASIC19.27■□□□□ 0.67
CHRNA5P30532 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA5P30532 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA5P30532 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA5P30532 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CHRNA5P30532 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CHRNA5P30532 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CHRNA5P30532 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA5P30532 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA5P30532 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA5P30532 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
CHRNA5P30532 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC19.26■□□□□ 0.67
CHRNA5P30532 SMS-201ENST00000379404 1174 ntTSL 3 BASIC19.26■□□□□ 0.67
CHRNA5P30532 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA5P30532 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA5P30532 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CHRNA5P30532 FTLP1-201ENST00000449155 526 ntBASIC19.26■□□□□ 0.67
CHRNA5P30532 RN7SL11P-201ENST00000471305 293 ntBASIC19.26■□□□□ 0.67
CHRNA5P30532 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC19.26■□□□□ 0.67
CHRNA5P30532 AC005730.2-201ENST00000564549 1184 ntBASIC19.26■□□□□ 0.67
CHRNA5P30532 RN7SL574P-201ENST00000581512 297 ntBASIC19.26■□□□□ 0.67
CHRNA5P30532 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CHRNA5P30532 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA5P30532 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA5P30532 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA5P30532 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA5P30532 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA5P30532 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.26■□□□□ 0.67
CHRNA5P30532 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA5P30532 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CHRNA5P30532 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC19.26■□□□□ 0.67
CHRNA5P30532 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CHRNA5P30532 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CHRNA5P30532 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA5P30532 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA5P30532 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA5P30532 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CHRNA5P30532 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA5P30532 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.25■□□□□ 0.67
CHRNA5P30532 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.25■□□□□ 0.67
CHRNA5P30532 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.25■□□□□ 0.67
CHRNA5P30532 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA5P30532 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA5P30532 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC19.25■□□□□ 0.67
CHRNA5P30532 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC19.25■□□□□ 0.67
CHRNA5P30532 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA5P30532 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA5P30532 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CHRNA5P30532 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CHRNA5P30532 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC19.25■□□□□ 0.67
CHRNA5P30532 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC19.25■□□□□ 0.67
CHRNA5P30532 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC19.25■□□□□ 0.67
CHRNA5P30532 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC19.25■□□□□ 0.67
CHRNA5P30532 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CHRNA5P30532 RN7SL774P-201ENST00000577467 290 ntBASIC19.25■□□□□ 0.67
CHRNA5P30532 RN7SL48P-201ENST00000579283 293 ntBASIC19.25■□□□□ 0.67
CHRNA5P30532 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CHRNA5P30532 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CHRNA5P30532 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA5P30532 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA5P30532 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CHRNA5P30532 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA5P30532 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CHRNA5P30532 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA5P30532 TUBBP5-203ENST00000508529 1334 ntBASIC19.25■□□□□ 0.67
CHRNA5P30532 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA5P30532 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA5P30532 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.24■□□□□ 0.67
CHRNA5P30532 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.24■□□□□ 0.67
CHRNA5P30532 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CHRNA5P30532 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA5P30532 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms