Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TNFSF4P23510 AC006449.5-201ENST00000610658 2098 ntBASIC13.67□□□□□ -0.22
TNFSF4P23510 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TNFSF4P23510 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TNFSF4P23510 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TNFSF4P23510 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TNFSF4P23510 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
TNFSF4P23510 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TNFSF4P23510 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.67□□□□□ -0.22
TNFSF4P23510 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.67□□□□□ -0.22
TNFSF4P23510 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TNFSF4P23510 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.67□□□□□ -0.22
TNFSF4P23510 TREML5P-201ENST00000421694 576 ntBASIC13.67□□□□□ -0.22
TNFSF4P23510 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.67□□□□□ -0.22
TNFSF4P23510 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.67□□□□□ -0.22
TNFSF4P23510 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.67□□□□□ -0.22
TNFSF4P23510 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.67□□□□□ -0.22
TNFSF4P23510 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TNFSF4P23510 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.67□□□□□ -0.22
TNFSF4P23510 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.67□□□□□ -0.22
TNFSF4P23510 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.67□□□□□ -0.22
TNFSF4P23510 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TNFSF4P23510 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TNFSF4P23510 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TNFSF4P23510 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TNFSF4P23510 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TNFSF4P23510 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TNFSF4P23510 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.67□□□□□ -0.22
TNFSF4P23510 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
TNFSF4P23510 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TNFSF4P23510 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TNFSF4P23510 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TNFSF4P23510 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.67□□□□□ -0.22
TNFSF4P23510 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.67□□□□□ -0.22
TNFSF4P23510 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.67□□□□□ -0.22
TNFSF4P23510 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TNFSF4P23510 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TNFSF4P23510 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.67□□□□□ -0.22
TNFSF4P23510 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TNFSF4P23510 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TNFSF4P23510 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TNFSF4P23510 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TNFSF4P23510 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
TNFSF4P23510 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TNFSF4P23510 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TNFSF4P23510 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TNFSF4P23510 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.66□□□□□ -0.22
TNFSF4P23510 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.66□□□□□ -0.22
TNFSF4P23510 AL691432.1-201ENST00000596308 1422 ntBASIC13.66□□□□□ -0.22
TNFSF4P23510 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TNFSF4P23510 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TNFSF4P23510 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.66□□□□□ -0.22
TNFSF4P23510 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TNFSF4P23510 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.66□□□□□ -0.22
TNFSF4P23510 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.66□□□□□ -0.22
TNFSF4P23510 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
TNFSF4P23510 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TNFSF4P23510 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
TNFSF4P23510 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TNFSF4P23510 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.66□□□□□ -0.22
TNFSF4P23510 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.66□□□□□ -0.22
TNFSF4P23510 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TNFSF4P23510 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TNFSF4P23510 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TNFSF4P23510 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TNFSF4P23510 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.66□□□□□ -0.22
TNFSF4P23510 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.66□□□□□ -0.22
TNFSF4P23510 AC093214.1-201ENST00000511688 1107 ntBASIC13.66□□□□□ -0.22
TNFSF4P23510 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.66□□□□□ -0.22
TNFSF4P23510 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.66□□□□□ -0.22
TNFSF4P23510 DUX4L27-201ENST00000554796 1261 ntBASIC13.66□□□□□ -0.22
TNFSF4P23510 AL079307.3-201ENST00000556114 283 ntBASIC13.66□□□□□ -0.22
TNFSF4P23510 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.66□□□□□ -0.22
TNFSF4P23510 MIR6069-201ENST00000620069 79 ntBASIC13.66□□□□□ -0.22
TNFSF4P23510 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.66□□□□□ -0.22
TNFSF4P23510 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.66□□□□□ -0.22
TNFSF4P23510 PCDH8P1-201ENST00000428983 2773 ntBASIC13.66□□□□□ -0.22
TNFSF4P23510 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.66□□□□□ -0.22
TNFSF4P23510 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TNFSF4P23510 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.66□□□□□ -0.22
TNFSF4P23510 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TNFSF4P23510 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TNFSF4P23510 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TNFSF4P23510 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.66□□□□□ -0.22
TNFSF4P23510 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TNFSF4P23510 MYO15B-237ENST00000642007 4893 ntBASIC13.66□□□□□ -0.22
TNFSF4P23510 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TNFSF4P23510 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.66□□□□□ -0.22
TNFSF4P23510 CYP4F24P-201ENST00000586049 1580 ntBASIC13.66□□□□□ -0.22
TNFSF4P23510 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
TNFSF4P23510 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.66□□□□□ -0.22
TNFSF4P23510 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.66□□□□□ -0.22
TNFSF4P23510 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TNFSF4P23510 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TNFSF4P23510 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TNFSF4P23510 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TNFSF4P23510 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TNFSF4P23510 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TNFSF4P23510 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
TNFSF4P23510 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms