Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH3P22223 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH3P22223 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH3P22223 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH3P22223 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
CDH3P22223 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CDH3P22223 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH3P22223 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH3P22223 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH3P22223 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDH3P22223 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.69■□□□□ 0.1
CDH3P22223 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.69■□□□□ 0.1
CDH3P22223 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH3P22223 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH3P22223 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH3P22223 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH3P22223 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CDH3P22223 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CDH3P22223 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH3P22223 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.69■□□□□ 0.1
CDH3P22223 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.69■□□□□ 0.1
CDH3P22223 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.69■□□□□ 0.1
CDH3P22223 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH3P22223 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDH3P22223 SPCS2P1-201ENST00000561636 679 ntBASIC15.69■□□□□ 0.1
CDH3P22223 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.69■□□□□ 0.1
CDH3P22223 AL390955.2-201ENST00000603032 514 ntBASIC15.69■□□□□ 0.1
CDH3P22223 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH3P22223 AL035456.1-201ENST00000456064 1369 ntBASIC15.69■□□□□ 0.1
CDH3P22223 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.69■□□□□ 0.1
CDH3P22223 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.69■□□□□ 0.1
CDH3P22223 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CDH3P22223 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.69■□□□□ 0.1
CDH3P22223 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH3P22223 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CDH3P22223 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH3P22223 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH3P22223 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH3P22223 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CDH3P22223 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH3P22223 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.69■□□□□ 0.1
CDH3P22223 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDH3P22223 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH3P22223 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH3P22223 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH3P22223 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CDH3P22223 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH3P22223 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH3P22223 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH3P22223 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.68■□□□□ 0.1
CDH3P22223 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.68■□□□□ 0.1
CDH3P22223 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CDH3P22223 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.68■□□□□ 0.1
CDH3P22223 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.68■□□□□ 0.1
CDH3P22223 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CDH3P22223 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH3P22223 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CDH3P22223 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH3P22223 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH3P22223 AC092171.3-201ENST00000610122 2651 ntBASIC15.68■□□□□ 0.1
CDH3P22223 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH3P22223 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH3P22223 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH3P22223 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH3P22223 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.68■□□□□ 0.1
CDH3P22223 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CDH3P22223 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH3P22223 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.68■□□□□ 0.1
CDH3P22223 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH3P22223 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH3P22223 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH3P22223 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH3P22223 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.68■□□□□ 0.1
CDH3P22223 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.68■□□□□ 0.1
CDH3P22223 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH3P22223 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CDH3P22223 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.68■□□□□ 0.1
CDH3P22223 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.68■□□□□ 0.1
CDH3P22223 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.68■□□□□ 0.1
CDH3P22223 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH3P22223 AC092364.2-202ENST00000597012 1073 ntBASIC15.68■□□□□ 0.1
CDH3P22223 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.68■□□□□ 0.1
CDH3P22223 AC073592.8-201ENST00000624126 511 ntBASIC15.68■□□□□ 0.1
CDH3P22223 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH3P22223 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH3P22223 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH3P22223 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH3P22223 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH3P22223 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH3P22223 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH3P22223 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH3P22223 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.68■□□□□ 0.1
CDH3P22223 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.68■□□□□ 0.1
CDH3P22223 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.68■□□□□ 0.1
CDH3P22223 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH3P22223 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CDH3P22223 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH3P22223 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH3P22223 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.67■□□□□ 0.1
CDH3P22223 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms