Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB4AP20338 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
RAB4AP20338 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
RAB4AP20338 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB4AP20338 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RAB4AP20338 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.3□□□□□ -0.44
RAB4AP20338 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
RAB4AP20338 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC12.29□□□□□ -0.44
RAB4AP20338 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB4AP20338 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB4AP20338 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
RAB4AP20338 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB4AP20338 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB4AP20338 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB4AP20338 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
RAB4AP20338 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB4AP20338 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB4AP20338 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC12.29□□□□□ -0.44
RAB4AP20338 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC12.29□□□□□ -0.44
RAB4AP20338 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB4AP20338 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB4AP20338 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
RAB4AP20338 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB4AP20338 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB4AP20338 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB4AP20338 CYP2D8P-201ENST00000433633 1490 ntBASIC12.29□□□□□ -0.44
RAB4AP20338 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC12.29□□□□□ -0.44
RAB4AP20338 PC-204ENST00000524491 1714 ntTSL 2 BASIC12.29□□□□□ -0.44
RAB4AP20338 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
RAB4AP20338 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB4AP20338 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB4AP20338 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB4AP20338 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.29□□□□□ -0.44
RAB4AP20338 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB4AP20338 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB4AP20338 WARS-232ENST00000556645 2508 ntTSL 5 BASIC12.29□□□□□ -0.44
RAB4AP20338 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.29□□□□□ -0.44
RAB4AP20338 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB4AP20338 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB4AP20338 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB4AP20338 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB4AP20338 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB4AP20338 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC12.29□□□□□ -0.44
RAB4AP20338 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC12.29□□□□□ -0.44
RAB4AP20338 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC12.29□□□□□ -0.44
RAB4AP20338 FAM201B-201ENST00000458407 597 ntBASIC12.29□□□□□ -0.44
RAB4AP20338 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB4AP20338 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC12.29□□□□□ -0.44
RAB4AP20338 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB4AP20338 STK19B-204ENST00000512515 211 ntBASIC12.29□□□□□ -0.44
RAB4AP20338 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC12.29□□□□□ -0.44
RAB4AP20338 GPR32P1-201ENST00000601788 811 ntBASIC12.29□□□□□ -0.44
RAB4AP20338 Z99916.2-201ENST00000604037 246 ntBASIC12.29□□□□□ -0.44
RAB4AP20338 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC12.29□□□□□ -0.44
RAB4AP20338 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
RAB4AP20338 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB4AP20338 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
RAB4AP20338 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB4AP20338 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.29□□□□□ -0.44
RAB4AP20338 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB4AP20338 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB4AP20338 AC009336.1-201ENST00000608941 1553 ntBASIC12.29□□□□□ -0.44
RAB4AP20338 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB4AP20338 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.29□□□□□ -0.44
RAB4AP20338 AC005562.1-201ENST00000583030 3219 ntBASIC12.29□□□□□ -0.44
RAB4AP20338 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB4AP20338 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB4AP20338 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
RAB4AP20338 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.29□□□□□ -0.44
RAB4AP20338 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB4AP20338 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB4AP20338 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.29□□□□□ -0.44
RAB4AP20338 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB4AP20338 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.29□□□□□ -0.44
RAB4AP20338 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC12.29□□□□□ -0.44
RAB4AP20338 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB4AP20338 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
RAB4AP20338 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB4AP20338 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC12.28□□□□□ -0.44
RAB4AP20338 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC12.28□□□□□ -0.44
RAB4AP20338 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB4AP20338 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC12.28□□□□□ -0.44
RAB4AP20338 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC12.28□□□□□ -0.44
RAB4AP20338 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
RAB4AP20338 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.28□□□□□ -0.44
RAB4AP20338 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB4AP20338 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RAB4AP20338 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB4AP20338 AL109954.1-202ENST00000564051 2148 ntBASIC12.28□□□□□ -0.44
RAB4AP20338 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
RAB4AP20338 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB4AP20338 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB4AP20338 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
RAB4AP20338 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.28□□□□□ -0.44
RAB4AP20338 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB4AP20338 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB4AP20338 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC12.28□□□□□ -0.44
RAB4AP20338 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB4AP20338 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
RAB4AP20338 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms