Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NFKB1P19838 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NFKB1P19838 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.2■□□□□ 0.18
NFKB1P19838 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.2■□□□□ 0.18
NFKB1P19838 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NFKB1P19838 AL139400.1-201ENST00000366220 510 ntBASIC16.2■□□□□ 0.18
NFKB1P19838 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NFKB1P19838 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NFKB1P19838 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NFKB1P19838 SPDYE7P-202ENST00000420373 878 ntBASIC16.2■□□□□ 0.18
NFKB1P19838 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NFKB1P19838 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.2■□□□□ 0.18
NFKB1P19838 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.2■□□□□ 0.18
NFKB1P19838 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
NFKB1P19838 AL512356.2-201ENST00000546955 174 ntBASIC16.2■□□□□ 0.18
NFKB1P19838 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.2■□□□□ 0.18
NFKB1P19838 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.2■□□□□ 0.18
NFKB1P19838 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NFKB1P19838 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NFKB1P19838 AC073347.1-201ENST00000421633 2643 ntBASIC16.2■□□□□ 0.18
NFKB1P19838 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.2■□□□□ 0.18
NFKB1P19838 AC020658.6-201ENST00000623564 1870 ntBASIC16.2■□□□□ 0.18
NFKB1P19838 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
NFKB1P19838 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NFKB1P19838 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NFKB1P19838 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.2■□□□□ 0.18
NFKB1P19838 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NFKB1P19838 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NFKB1P19838 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NFKB1P19838 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.19■□□□□ 0.18
NFKB1P19838 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NFKB1P19838 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.19■□□□□ 0.18
NFKB1P19838 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NFKB1P19838 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NFKB1P19838 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.19■□□□□ 0.18
NFKB1P19838 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.19■□□□□ 0.18
NFKB1P19838 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NFKB1P19838 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NFKB1P19838 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.19■□□□□ 0.18
NFKB1P19838 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.19■□□□□ 0.18
NFKB1P19838 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.19■□□□□ 0.18
NFKB1P19838 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.19■□□□□ 0.18
NFKB1P19838 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NFKB1P19838 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.19■□□□□ 0.18
NFKB1P19838 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NFKB1P19838 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NFKB1P19838 AL035456.1-201ENST00000456064 1369 ntBASIC16.19■□□□□ 0.18
NFKB1P19838 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
NFKB1P19838 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
NFKB1P19838 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NFKB1P19838 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.19■□□□□ 0.18
NFKB1P19838 TSEN15P1-201ENST00000423257 515 ntBASIC16.19■□□□□ 0.18
NFKB1P19838 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.19■□□□□ 0.18
NFKB1P19838 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
NFKB1P19838 HNRNPUP1-201ENST00000554987 333 ntBASIC16.19■□□□□ 0.18
NFKB1P19838 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.19■□□□□ 0.18
NFKB1P19838 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NFKB1P19838 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.19■□□□□ 0.18
NFKB1P19838 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.19■□□□□ 0.18
NFKB1P19838 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.19■□□□□ 0.18
NFKB1P19838 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NFKB1P19838 AC136621.1-201ENST00000624017 2304 ntBASIC16.19■□□□□ 0.18
NFKB1P19838 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NFKB1P19838 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NFKB1P19838 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NFKB1P19838 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NFKB1P19838 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NFKB1P19838 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.19■□□□□ 0.18
NFKB1P19838 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.19■□□□□ 0.18
NFKB1P19838 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.19■□□□□ 0.18
NFKB1P19838 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
NFKB1P19838 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
NFKB1P19838 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NFKB1P19838 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.18■□□□□ 0.18
NFKB1P19838 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NFKB1P19838 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
NFKB1P19838 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NFKB1P19838 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.18■□□□□ 0.18
NFKB1P19838 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.18■□□□□ 0.18
NFKB1P19838 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.18■□□□□ 0.18
NFKB1P19838 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.18■□□□□ 0.18
NFKB1P19838 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NFKB1P19838 SPDYE17-201ENST00000412399 783 ntBASIC16.18■□□□□ 0.18
NFKB1P19838 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NFKB1P19838 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.18■□□□□ 0.18
NFKB1P19838 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.18■□□□□ 0.18
NFKB1P19838 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NFKB1P19838 HLA-J-203ENST00000494367 1087 ntBASIC16.18■□□□□ 0.18
NFKB1P19838 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.18■□□□□ 0.18
NFKB1P19838 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NFKB1P19838 AC069262.1-201ENST00000539058 672 ntBASIC16.18■□□□□ 0.18
NFKB1P19838 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NFKB1P19838 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NFKB1P19838 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
NFKB1P19838 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NFKB1P19838 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.18■□□□□ 0.18
NFKB1P19838 AC079781.4-201ENST00000641908 219 ntBASIC16.18■□□□□ 0.18
NFKB1P19838 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NFKB1P19838 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.18■□□□□ 0.18
NFKB1P19838 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms