Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
NCLP19338 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
NCLP19338 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NCLP19338 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.08■□□□□ 0.64
NCLP19338 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.08■□□□□ 0.64
NCLP19338 AC006557.2-201ENST00000592985 1240 ntBASIC19.08■□□□□ 0.64
NCLP19338 Z83851.2-201ENST00000609564 659 ntBASIC19.08■□□□□ 0.64
NCLP19338 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.64
NCLP19338 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.08■□□□□ 0.64
NCLP19338 AL805961.1-202ENST00000641562 540 ntBASIC19.08■□□□□ 0.64
NCLP19338 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
NCLP19338 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NCLP19338 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NCLP19338 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
NCLP19338 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NCLP19338 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NCLP19338 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
NCLP19338 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
NCLP19338 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
NCLP19338 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
NCLP19338 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCLP19338 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
NCLP19338 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCLP19338 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCLP19338 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCLP19338 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NCLP19338 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC19.07■□□□□ 0.64
NCLP19338 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCLP19338 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
NCLP19338 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC19.07■□□□□ 0.64
NCLP19338 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC19.07■□□□□ 0.64
NCLP19338 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCLP19338 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCLP19338 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.07■□□□□ 0.64
NCLP19338 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCLP19338 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCLP19338 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCLP19338 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NCLP19338 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCLP19338 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.07■□□□□ 0.64
NCLP19338 MIR648-201ENST00000385046 94 ntBASIC19.07■□□□□ 0.64
NCLP19338 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.07■□□□□ 0.64
NCLP19338 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.07■□□□□ 0.64
NCLP19338 AC010654.1-201ENST00000615722 808 ntBASIC19.07■□□□□ 0.64
NCLP19338 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.07■□□□□ 0.64
NCLP19338 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCLP19338 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NCLP19338 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NCLP19338 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCLP19338 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NCLP19338 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
NCLP19338 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NCLP19338 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC19.07■□□□□ 0.64
NCLP19338 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NCLP19338 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC19.07■□□□□ 0.64
NCLP19338 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
NCLP19338 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCLP19338 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCLP19338 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCLP19338 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC19.07■□□□□ 0.64
NCLP19338 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCLP19338 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC19.07■□□□□ 0.64
NCLP19338 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC19.07■□□□□ 0.64
NCLP19338 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCLP19338 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCLP19338 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NCLP19338 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCLP19338 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NCLP19338 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC19.06■□□□□ 0.64
NCLP19338 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCLP19338 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCLP19338 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
NCLP19338 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCLP19338 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC19.06■□□□□ 0.64
NCLP19338 PMS2P7-201ENST00000506558 1336 ntBASIC19.06■□□□□ 0.64
NCLP19338 AC069224.1-201ENST00000566372 1715 ntBASIC19.06■□□□□ 0.64
NCLP19338 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCLP19338 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
NCLP19338 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC19.06■□□□□ 0.64
NCLP19338 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCLP19338 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCLP19338 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
NCLP19338 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCLP19338 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCLP19338 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.06■□□□□ 0.64
NCLP19338 AC073621.1-201ENST00000392730 636 ntBASIC19.06■□□□□ 0.64
NCLP19338 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.06■□□□□ 0.64
NCLP19338 UNC93B6-202ENST00000528242 690 ntBASIC19.06■□□□□ 0.64
NCLP19338 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.06■□□□□ 0.64
NCLP19338 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.06■□□□□ 0.64
NCLP19338 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCLP19338 AL356488.2-201ENST00000602755 427 ntBASIC19.06■□□□□ 0.64
NCLP19338 AC006538.3-201ENST00000612495 578 ntBASIC19.06■□□□□ 0.64
NCLP19338 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCLP19338 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NCLP19338 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC19.06■□□□□ 0.64
NCLP19338 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCLP19338 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NCLP19338 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCLP19338 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms