Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SCG2P13521 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.27■□□□□ 0.52
SCG2P13521 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SCG2P13521 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.27■□□□□ 0.52
SCG2P13521 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SCG2P13521 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SCG2P13521 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.27■□□□□ 0.52
SCG2P13521 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.27■□□□□ 0.52
SCG2P13521 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
SCG2P13521 AC074044.1-201ENST00000609673 707 ntBASIC18.27■□□□□ 0.52
SCG2P13521 AC008738.7-201ENST00000609744 511 ntBASIC18.27■□□□□ 0.52
SCG2P13521 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.27■□□□□ 0.52
SCG2P13521 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.27■□□□□ 0.52
SCG2P13521 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SCG2P13521 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.27■□□□□ 0.51
SCG2P13521 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.27■□□□□ 0.51
SCG2P13521 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SCG2P13521 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SCG2P13521 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.27■□□□□ 0.51
SCG2P13521 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.27■□□□□ 0.51
SCG2P13521 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SCG2P13521 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.27■□□□□ 0.51
SCG2P13521 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.27■□□□□ 0.51
SCG2P13521 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
SCG2P13521 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCG2P13521 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SCG2P13521 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCG2P13521 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCG2P13521 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
SCG2P13521 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SCG2P13521 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.26■□□□□ 0.51
SCG2P13521 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCG2P13521 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCG2P13521 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCG2P13521 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.26■□□□□ 0.51
SCG2P13521 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCG2P13521 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.26■□□□□ 0.51
SCG2P13521 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCG2P13521 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCG2P13521 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCG2P13521 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.26■□□□□ 0.51
SCG2P13521 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.26■□□□□ 0.51
SCG2P13521 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SCG2P13521 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SCG2P13521 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.26■□□□□ 0.51
SCG2P13521 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.26■□□□□ 0.51
SCG2P13521 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.26■□□□□ 0.51
SCG2P13521 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.26■□□□□ 0.51
SCG2P13521 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.26■□□□□ 0.51
SCG2P13521 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.26■□□□□ 0.51
SCG2P13521 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.26■□□□□ 0.51
SCG2P13521 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SCG2P13521 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.26■□□□□ 0.51
SCG2P13521 AC239800.4-201ENST00000603712 296 ntBASIC18.26■□□□□ 0.51
SCG2P13521 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SCG2P13521 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCG2P13521 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.26■□□□□ 0.51
SCG2P13521 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SCG2P13521 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.26■□□□□ 0.51
SCG2P13521 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.26■□□□□ 0.51
SCG2P13521 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCG2P13521 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCG2P13521 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SCG2P13521 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCG2P13521 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.26■□□□□ 0.51
SCG2P13521 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCG2P13521 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCG2P13521 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCG2P13521 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SCG2P13521 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SCG2P13521 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SCG2P13521 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.25■□□□□ 0.51
SCG2P13521 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SCG2P13521 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.25■□□□□ 0.51
SCG2P13521 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SCG2P13521 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.25■□□□□ 0.51
SCG2P13521 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SCG2P13521 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.25■□□□□ 0.51
SCG2P13521 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCG2P13521 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SCG2P13521 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.25■□□□□ 0.51
SCG2P13521 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.25■□□□□ 0.51
SCG2P13521 AC114501.2-201ENST00000439631 535 ntBASIC18.25■□□□□ 0.51
SCG2P13521 RPL13P2-201ENST00000440687 659 ntBASIC18.25■□□□□ 0.51
SCG2P13521 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.25■□□□□ 0.51
SCG2P13521 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.25■□□□□ 0.51
SCG2P13521 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.25■□□□□ 0.51
SCG2P13521 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.25■□□□□ 0.51
SCG2P13521 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.25■□□□□ 0.51
SCG2P13521 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SCG2P13521 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.25■□□□□ 0.51
SCG2P13521 LINC01115-203ENST00000606068 577 ntBASIC18.25■□□□□ 0.51
SCG2P13521 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.25■□□□□ 0.51
SCG2P13521 AC004840.1-201ENST00000636359 365 ntBASIC18.25■□□□□ 0.51
SCG2P13521 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.25■□□□□ 0.51
SCG2P13521 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCG2P13521 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SCG2P13521 BTBD7P1-201ENST00000447253 1453 ntBASIC18.25■□□□□ 0.51
SCG2P13521 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCG2P13521 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms