Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.72■□□□□ 0.59
TOP1P11387 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TOP1P11387 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TOP1P11387 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
TOP1P11387 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TOP1P11387 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
TOP1P11387 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TOP1P11387 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TOP1P11387 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TOP1P11387 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.71■□□□□ 0.59
TOP1P11387 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TOP1P11387 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.71■□□□□ 0.59
TOP1P11387 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.71■□□□□ 0.59
TOP1P11387 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TOP1P11387 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TOP1P11387 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.71■□□□□ 0.59
TOP1P11387 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TOP1P11387 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TOP1P11387 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.71■□□□□ 0.59
TOP1P11387 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TOP1P11387 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.71■□□□□ 0.59
TOP1P11387 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.71■□□□□ 0.59
TOP1P11387 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TOP1P11387 AC025048.3-201ENST00000590609 569 ntBASIC18.71■□□□□ 0.59
TOP1P11387 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TOP1P11387 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.71■□□□□ 0.59
TOP1P11387 AC005702.4-201ENST00000618393 416 ntBASIC18.71■□□□□ 0.59
TOP1P11387 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.71■□□□□ 0.59
TOP1P11387 AL109936.8-201ENST00000641772 604 ntBASIC18.71■□□□□ 0.59
TOP1P11387 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.71■□□□□ 0.59
TOP1P11387 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
TOP1P11387 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TOP1P11387 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TOP1P11387 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TOP1P11387 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TOP1P11387 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TOP1P11387 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TOP1P11387 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.71■□□□□ 0.59
TOP1P11387 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TOP1P11387 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TOP1P11387 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.71■□□□□ 0.59
TOP1P11387 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TOP1P11387 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TOP1P11387 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TOP1P11387 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
TOP1P11387 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TOP1P11387 AC105917.1-201ENST00000506637 2539 ntBASIC18.7■□□□□ 0.58
TOP1P11387 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TOP1P11387 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TOP1P11387 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TOP1P11387 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TOP1P11387 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TOP1P11387 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.7■□□□□ 0.58
TOP1P11387 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TOP1P11387 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TOP1P11387 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
TOP1P11387 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TOP1P11387 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TOP1P11387 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.7■□□□□ 0.58
TOP1P11387 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TOP1P11387 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.7■□□□□ 0.58
TOP1P11387 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TOP1P11387 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.7■□□□□ 0.58
TOP1P11387 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.7■□□□□ 0.58
TOP1P11387 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.7■□□□□ 0.58
TOP1P11387 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.7■□□□□ 0.58
TOP1P11387 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.7■□□□□ 0.58
TOP1P11387 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.7■□□□□ 0.58
TOP1P11387 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TOP1P11387 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TOP1P11387 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
TOP1P11387 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.7■□□□□ 0.58
TOP1P11387 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.7■□□□□ 0.58
TOP1P11387 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TOP1P11387 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TOP1P11387 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TOP1P11387 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TOP1P11387 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TOP1P11387 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TOP1P11387 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TOP1P11387 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.69■□□□□ 0.58
TOP1P11387 LINC00554-201ENST00000564841 3011 ntBASIC18.69■□□□□ 0.58
TOP1P11387 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TOP1P11387 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.69■□□□□ 0.58
TOP1P11387 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TOP1P11387 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
TOP1P11387 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TOP1P11387 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.69■□□□□ 0.58
TOP1P11387 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TOP1P11387 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.69■□□□□ 0.58
TOP1P11387 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.69■□□□□ 0.58
TOP1P11387 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
TOP1P11387 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TOP1P11387 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.69■□□□□ 0.58
TOP1P11387 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TOP1P11387 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TOP1P11387 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TOP1P11387 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TOP1P11387 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.69■□□□□ 0.58
TOP1P11387 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms