Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.75■□□□□ 0.27
RARAP10276 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RARAP10276 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RARAP10276 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RARAP10276 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.75■□□□□ 0.27
RARAP10276 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.75■□□□□ 0.27
RARAP10276 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RARAP10276 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RARAP10276 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RARAP10276 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RARAP10276 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
RARAP10276 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.74■□□□□ 0.27
RARAP10276 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.74■□□□□ 0.27
RARAP10276 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.74■□□□□ 0.27
RARAP10276 AC090616.6-203ENST00000579186 1945 ntBASIC16.74■□□□□ 0.27
RARAP10276 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RARAP10276 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RARAP10276 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RARAP10276 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RARAP10276 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RARAP10276 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.74■□□□□ 0.27
RARAP10276 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
RARAP10276 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.74■□□□□ 0.27
RARAP10276 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RARAP10276 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RARAP10276 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RARAP10276 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.74■□□□□ 0.27
RARAP10276 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RARAP10276 AC004461.1-201ENST00000412461 403 ntBASIC16.74■□□□□ 0.27
RARAP10276 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
RARAP10276 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.74■□□□□ 0.27
RARAP10276 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RARAP10276 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.74■□□□□ 0.27
RARAP10276 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.74■□□□□ 0.27
RARAP10276 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.74■□□□□ 0.27
RARAP10276 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RARAP10276 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.74■□□□□ 0.27
RARAP10276 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RARAP10276 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.74■□□□□ 0.27
RARAP10276 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
RARAP10276 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RARAP10276 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.74■□□□□ 0.27
RARAP10276 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RARAP10276 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RARAP10276 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RARAP10276 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RARAP10276 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RARAP10276 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RARAP10276 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RARAP10276 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RARAP10276 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
RARAP10276 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RARAP10276 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.74■□□□□ 0.27
RARAP10276 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RARAP10276 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.74■□□□□ 0.27
RARAP10276 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.74■□□□□ 0.27
RARAP10276 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RARAP10276 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RARAP10276 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.73■□□□□ 0.27
RARAP10276 AL136982.4-201ENST00000437689 1740 ntBASIC16.73■□□□□ 0.27
RARAP10276 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RARAP10276 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RARAP10276 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
RARAP10276 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
RARAP10276 BNIP3P1-202ENST00000550043 1585 ntBASIC16.73■□□□□ 0.27
RARAP10276 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.73■□□□□ 0.27
RARAP10276 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RARAP10276 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RARAP10276 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RARAP10276 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RARAP10276 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RARAP10276 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
RARAP10276 UPF3AP3-201ENST00000420996 769 ntBASIC16.73■□□□□ 0.27
RARAP10276 FAM58DP-201ENST00000428076 619 ntBASIC16.73■□□□□ 0.27
RARAP10276 AC005237.2-201ENST00000434368 219 ntBASIC16.73■□□□□ 0.27
RARAP10276 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.73■□□□□ 0.27
RARAP10276 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.73■□□□□ 0.27
RARAP10276 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.73■□□□□ 0.27
RARAP10276 AC243562.2-201ENST00000561247 970 ntBASIC16.73■□□□□ 0.27
RARAP10276 AC093520.2-201ENST00000561830 333 ntBASIC16.73■□□□□ 0.27
RARAP10276 MIR3687-2-201ENST00000577708 61 ntBASIC16.73■□□□□ 0.27
RARAP10276 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.73■□□□□ 0.27
RARAP10276 MIR3687-1-201ENST00000614492 61 ntBASIC16.73■□□□□ 0.27
RARAP10276 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RARAP10276 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RARAP10276 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RARAP10276 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RARAP10276 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RARAP10276 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RARAP10276 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RARAP10276 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RARAP10276 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RARAP10276 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RARAP10276 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.73■□□□□ 0.27
RARAP10276 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
RARAP10276 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RARAP10276 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RARAP10276 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RARAP10276 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.73■□□□□ 0.27
RARAP10276 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms