Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC172P0C7W6 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC172P0C7W6 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC172P0C7W6 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC172P0C7W6 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC172P0C7W6 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.3■□□□□ 0.36
CCDC172P0C7W6 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC172P0C7W6 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 AC126177.1-201ENST00000547829 2218 ntBASIC17.29■□□□□ 0.36
CCDC172P0C7W6 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 USP31-203ENST00000567975 2142 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 AC140113.2-201ENST00000604370 208 ntBASIC17.29■□□□□ 0.36
CCDC172P0C7W6 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 AL137784.3-201ENST00000623858 2288 ntBASIC17.29■□□□□ 0.36
CCDC172P0C7W6 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC172P0C7W6 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.28■□□□□ 0.36
CCDC172P0C7W6 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 TFAMP1-201ENST00000412727 736 ntBASIC17.28■□□□□ 0.36
CCDC172P0C7W6 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 AC120114.3-201ENST00000611923 658 ntBASIC17.28■□□□□ 0.36
CCDC172P0C7W6 AC092865.6-201ENST00000642101 219 ntBASIC17.28■□□□□ 0.36
CCDC172P0C7W6 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 PCDHA3-202ENST00000532566 4594 ntBASIC17.28■□□□□ 0.36
CCDC172P0C7W6 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.28■□□□□ 0.36
CCDC172P0C7W6 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC172P0C7W6 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC172P0C7W6 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC172P0C7W6 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms