Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERCC1P07992 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERCC1P07992 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.22□□□□□ -0.13
ERCC1P07992 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC1P07992 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC1P07992 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC1P07992 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.21□□□□□ -0.13
ERCC1P07992 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC1P07992 AC069224.1-201ENST00000566372 1715 ntBASIC14.21□□□□□ -0.13
ERCC1P07992 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC1P07992 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC1P07992 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.21□□□□□ -0.13
ERCC1P07992 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
ERCC1P07992 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.21□□□□□ -0.13
ERCC1P07992 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.21□□□□□ -0.13
ERCC1P07992 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC1P07992 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC1P07992 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC1P07992 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.21□□□□□ -0.13
ERCC1P07992 AC092474.2-201ENST00000424288 719 ntBASIC14.21□□□□□ -0.13
ERCC1P07992 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.21□□□□□ -0.13
ERCC1P07992 AC079140.1-201ENST00000508039 487 ntBASIC14.21□□□□□ -0.13
ERCC1P07992 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC1P07992 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC1P07992 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.21□□□□□ -0.13
ERCC1P07992 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.21□□□□□ -0.13
ERCC1P07992 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.21□□□□□ -0.13
ERCC1P07992 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.21□□□□□ -0.13
ERCC1P07992 AC099522.2-201ENST00000607001 744 ntBASIC14.21□□□□□ -0.13
ERCC1P07992 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.21□□□□□ -0.13
ERCC1P07992 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.21□□□□□ -0.13
ERCC1P07992 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC1P07992 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.21□□□□□ -0.13
ERCC1P07992 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC1P07992 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC1P07992 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
ERCC1P07992 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC1P07992 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC1P07992 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC1P07992 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC1P07992 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC1P07992 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
ERCC1P07992 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ERCC1P07992 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.21□□□□□ -0.14
ERCC1P07992 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
ERCC1P07992 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ERCC1P07992 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.21□□□□□ -0.14
ERCC1P07992 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC1P07992 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC1P07992 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC1P07992 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC1P07992 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC1P07992 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC1P07992 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC1P07992 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.2□□□□□ -0.14
ERCC1P07992 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.2□□□□□ -0.14
ERCC1P07992 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC1P07992 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC1P07992 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC1P07992 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC1P07992 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC1P07992 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC1P07992 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
ERCC1P07992 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC1P07992 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC1P07992 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC1P07992 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC1P07992 AL627223.1-201ENST00000416693 442 ntBASIC14.2□□□□□ -0.14
ERCC1P07992 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.2□□□□□ -0.14
ERCC1P07992 CNN2P2-201ENST00000443536 909 ntBASIC14.2□□□□□ -0.14
ERCC1P07992 CNN2P3-201ENST00000450201 906 ntBASIC14.2□□□□□ -0.14
ERCC1P07992 KRT18P34-201ENST00000488218 1270 ntBASIC14.2□□□□□ -0.14
ERCC1P07992 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
ERCC1P07992 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
ERCC1P07992 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC1P07992 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.2□□□□□ -0.14
ERCC1P07992 AL355385.1-201ENST00000606123 409 ntBASIC14.2□□□□□ -0.14
ERCC1P07992 AL136317.3-201ENST00000618497 906 ntBASIC14.2□□□□□ -0.14
ERCC1P07992 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.2□□□□□ -0.14
ERCC1P07992 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC1P07992 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
ERCC1P07992 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC1P07992 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.2□□□□□ -0.14
ERCC1P07992 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC1P07992 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.2□□□□□ -0.14
ERCC1P07992 AC005622.1-201ENST00000636801 1703 ntBASIC14.2□□□□□ -0.14
ERCC1P07992 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
ERCC1P07992 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC1P07992 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC1P07992 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC1P07992 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC1P07992 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC1P07992 UXT-AS1-201ENST00000590504 1525 ntBASIC14.2□□□□□ -0.14
ERCC1P07992 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
ERCC1P07992 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC1P07992 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.2□□□□□ -0.14
ERCC1P07992 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC1P07992 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.19□□□□□ -0.14
ERCC1P07992 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ERCC1P07992 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms