Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.02■□□□□ 0.64
POLR3DP05423 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
POLR3DP05423 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
POLR3DP05423 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.02■□□□□ 0.64
POLR3DP05423 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
POLR3DP05423 AC007950.2-201ENST00000615045 2347 ntBASIC19.02■□□□□ 0.64
POLR3DP05423 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.02■□□□□ 0.64
POLR3DP05423 AC046158.3-201ENST00000624947 2558 ntBASIC19.02■□□□□ 0.64
POLR3DP05423 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
POLR3DP05423 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
POLR3DP05423 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
POLR3DP05423 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.02■□□□□ 0.64
POLR3DP05423 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.02■□□□□ 0.64
POLR3DP05423 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
POLR3DP05423 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
POLR3DP05423 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
POLR3DP05423 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
POLR3DP05423 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
POLR3DP05423 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
POLR3DP05423 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19.02■□□□□ 0.64
POLR3DP05423 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
POLR3DP05423 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.02■□□□□ 0.64
POLR3DP05423 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
POLR3DP05423 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC19.02■□□□□ 0.64
POLR3DP05423 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
POLR3DP05423 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC19.02■□□□□ 0.64
POLR3DP05423 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC19.02■□□□□ 0.64
POLR3DP05423 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
POLR3DP05423 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
POLR3DP05423 AZGP1P1-201ENST00000411909 902 ntBASIC19.02■□□□□ 0.64
POLR3DP05423 AC093004.1-201ENST00000508850 424 ntBASIC19.02■□□□□ 0.64
POLR3DP05423 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC19.02■□□□□ 0.64
POLR3DP05423 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
POLR3DP05423 TP53TG3HP-202ENST00000569755 579 ntBASIC19.02■□□□□ 0.64
POLR3DP05423 AC074044.1-201ENST00000609673 707 ntBASIC19.02■□□□□ 0.64
POLR3DP05423 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
POLR3DP05423 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC19.02■□□□□ 0.64
POLR3DP05423 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
POLR3DP05423 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
POLR3DP05423 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
POLR3DP05423 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
POLR3DP05423 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
POLR3DP05423 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
POLR3DP05423 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
POLR3DP05423 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
POLR3DP05423 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.01■□□□□ 0.63
POLR3DP05423 AC063926.2-201ENST00000623766 1308 ntBASIC19.01■□□□□ 0.63
POLR3DP05423 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
POLR3DP05423 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
POLR3DP05423 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
POLR3DP05423 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
POLR3DP05423 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.01■□□□□ 0.63
POLR3DP05423 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
POLR3DP05423 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
POLR3DP05423 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
POLR3DP05423 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
POLR3DP05423 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
POLR3DP05423 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
POLR3DP05423 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
POLR3DP05423 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
POLR3DP05423 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
POLR3DP05423 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC19.01■□□□□ 0.63
POLR3DP05423 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC19.01■□□□□ 0.63
POLR3DP05423 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
POLR3DP05423 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
POLR3DP05423 AC087499.6-201ENST00000411576 835 ntBASIC19.01■□□□□ 0.63
POLR3DP05423 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
POLR3DP05423 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC19.01■□□□□ 0.63
POLR3DP05423 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC19.01■□□□□ 0.63
POLR3DP05423 AL589987.1-201ENST00000453380 819 ntBASIC19.01■□□□□ 0.63
POLR3DP05423 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC19.01■□□□□ 0.63
POLR3DP05423 RN7SL692P-201ENST00000464677 288 ntBASIC19.01■□□□□ 0.63
POLR3DP05423 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC19.01■□□□□ 0.63
POLR3DP05423 TPRX2P-201ENST00000535362 881 ntBASIC19.01■□□□□ 0.63
POLR3DP05423 TIMM17BP1-201ENST00000545713 516 ntBASIC19.01■□□□□ 0.63
POLR3DP05423 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
POLR3DP05423 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
POLR3DP05423 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
POLR3DP05423 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.01■□□□□ 0.63
POLR3DP05423 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
POLR3DP05423 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
POLR3DP05423 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
POLR3DP05423 AC010491.1-201ENST00000563101 2797 ntBASIC19.01■□□□□ 0.63
POLR3DP05423 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
POLR3DP05423 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
POLR3DP05423 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
POLR3DP05423 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
POLR3DP05423 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
POLR3DP05423 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
POLR3DP05423 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC19■□□□□ 0.63
POLR3DP05423 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
POLR3DP05423 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19■□□□□ 0.63
POLR3DP05423 ZBTB45P2-201ENST00000452245 1531 ntBASIC19■□□□□ 0.63
POLR3DP05423 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19■□□□□ 0.63
POLR3DP05423 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
POLR3DP05423 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19■□□□□ 0.63
POLR3DP05423 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19■□□□□ 0.63
POLR3DP05423 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
POLR3DP05423 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19■□□□□ 0.63
POLR3DP05423 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms