Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC19.13■□□□□ 0.65
APPP05067 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.13■□□□□ 0.65
APPP05067 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
APPP05067 AL844908.2-201ENST00000609461 460 ntBASIC19.13■□□□□ 0.65
APPP05067 AJ011932.1-201ENST00000621707 465 ntBASIC19.13■□□□□ 0.65
APPP05067 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC19.13■□□□□ 0.65
APPP05067 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
APPP05067 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
APPP05067 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
APPP05067 AC022144.1-201ENST00000602255 1580 ntBASIC19.13■□□□□ 0.65
APPP05067 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.13■□□□□ 0.65
APPP05067 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC19.13■□□□□ 0.65
APPP05067 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.13■□□□□ 0.65
APPP05067 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.13■□□□□ 0.65
APPP05067 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC19.13■□□□□ 0.65
APPP05067 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
APPP05067 LINC02447-202ENST00000501888 2146 ntBASIC19.13■□□□□ 0.65
APPP05067 AC024909.3-201ENST00000611513 2257 ntBASIC19.13■□□□□ 0.65
APPP05067 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
APPP05067 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
APPP05067 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
APPP05067 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
APPP05067 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
APPP05067 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
APPP05067 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
APPP05067 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
APPP05067 PCDHA1-201ENST00000378133 2726 ntBASIC19.12■□□□□ 0.65
APPP05067 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
APPP05067 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
APPP05067 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.12■□□□□ 0.65
APPP05067 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.12■□□□□ 0.65
APPP05067 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
APPP05067 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.12■□□□□ 0.65
APPP05067 REXO1L1P-202ENST00000608646 1974 ntBASIC19.12■□□□□ 0.65
APPP05067 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
APPP05067 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
APPP05067 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC19.12■□□□□ 0.65
APPP05067 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.12■□□□□ 0.65
APPP05067 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.12■□□□□ 0.65
APPP05067 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
APPP05067 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
APPP05067 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.12■□□□□ 0.65
APPP05067 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.12■□□□□ 0.65
APPP05067 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
APPP05067 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC19.12■□□□□ 0.65
APPP05067 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
APPP05067 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
APPP05067 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
APPP05067 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.12■□□□□ 0.65
APPP05067 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.12■□□□□ 0.65
APPP05067 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
APPP05067 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
APPP05067 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
APPP05067 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.12■□□□□ 0.65
APPP05067 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
APPP05067 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.12■□□□□ 0.65
APPP05067 AC008741.2-201ENST00000612792 3115 ntBASIC19.11■□□□□ 0.65
APPP05067 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
APPP05067 CDC14C-201ENST00000428251 1719 ntBASIC19.11■□□□□ 0.65
APPP05067 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC19.11■□□□□ 0.65
APPP05067 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC19.11■□□□□ 0.65
APPP05067 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
APPP05067 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
APPP05067 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
APPP05067 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
APPP05067 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
APPP05067 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
APPP05067 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
APPP05067 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
APPP05067 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
APPP05067 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC19.11■□□□□ 0.65
APPP05067 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
APPP05067 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
APPP05067 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
APPP05067 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.11■□□□□ 0.65
APPP05067 FO393414.2-201ENST00000405153 598 ntBASIC19.11■□□□□ 0.65
APPP05067 FAM8A3P-201ENST00000427218 844 ntBASIC19.11■□□□□ 0.65
APPP05067 TSPY16P-201ENST00000449843 468 ntBASIC19.11■□□□□ 0.65
APPP05067 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.11■□□□□ 0.65
APPP05067 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
APPP05067 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
APPP05067 AC010336.2-201ENST00000564226 506 ntBASIC19.11■□□□□ 0.65
APPP05067 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC19.11■□□□□ 0.65
APPP05067 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC19.11■□□□□ 0.65
APPP05067 AC092364.2-202ENST00000597012 1073 ntBASIC19.11■□□□□ 0.65
APPP05067 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC19.11■□□□□ 0.65
APPP05067 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC19.11■□□□□ 0.65
APPP05067 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
APPP05067 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
APPP05067 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
APPP05067 AC018892.3-201ENST00000623986 2499 ntBASIC19.11■□□□□ 0.65
APPP05067 AC018695.7-201ENST00000624587 2492 ntBASIC19.11■□□□□ 0.65
APPP05067 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
APPP05067 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
APPP05067 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
APPP05067 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
APPP05067 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
APPP05067 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC19.1■□□□□ 0.65
APPP05067 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
APPP05067 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms