Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.36■□□□□ 0.37
VTNP04004 AC133539.2-201ENST00000604757 467 ntBASIC17.36■□□□□ 0.37
VTNP04004 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.36■□□□□ 0.37
VTNP04004 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.36■□□□□ 0.37
VTNP04004 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VTNP04004 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
VTNP04004 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VTNP04004 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VTNP04004 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VTNP04004 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
VTNP04004 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VTNP04004 KRT8P22-201ENST00000562317 1415 ntBASIC17.36■□□□□ 0.37
VTNP04004 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
VTNP04004 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VTNP04004 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.36■□□□□ 0.37
VTNP04004 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VTNP04004 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.36■□□□□ 0.37
VTNP04004 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.36■□□□□ 0.37
VTNP04004 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VTNP04004 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.36■□□□□ 0.37
VTNP04004 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.36■□□□□ 0.37
VTNP04004 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VTNP04004 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.35■□□□□ 0.37
VTNP04004 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
VTNP04004 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.35■□□□□ 0.37
VTNP04004 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.35■□□□□ 0.37
VTNP04004 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VTNP04004 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
VTNP04004 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VTNP04004 AP003680.1-201ENST00000598970 3660 ntBASIC17.35■□□□□ 0.37
VTNP04004 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
VTNP04004 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VTNP04004 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.35■□□□□ 0.37
VTNP04004 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
VTNP04004 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VTNP04004 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.35■□□□□ 0.37
VTNP04004 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.35■□□□□ 0.37
VTNP04004 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.35■□□□□ 0.37
VTNP04004 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.35■□□□□ 0.37
VTNP04004 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VTNP04004 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.35■□□□□ 0.37
VTNP04004 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VTNP04004 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.35■□□□□ 0.37
VTNP04004 AC106886.1-201ENST00000568660 600 ntBASIC17.35■□□□□ 0.37
VTNP04004 AC017083.2-201ENST00000608069 979 ntBASIC17.35■□□□□ 0.37
VTNP04004 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.35■□□□□ 0.37
VTNP04004 CU634019.7-201ENST00000624153 1185 ntBASIC17.35■□□□□ 0.37
VTNP04004 FP236241.2-201ENST00000624906 1185 ntBASIC17.35■□□□□ 0.37
VTNP04004 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VTNP04004 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.35■□□□□ 0.37
VTNP04004 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VTNP04004 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VTNP04004 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VTNP04004 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VTNP04004 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.35■□□□□ 0.37
VTNP04004 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VTNP04004 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VTNP04004 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.35■□□□□ 0.37
VTNP04004 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.35■□□□□ 0.37
VTNP04004 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.35■□□□□ 0.37
VTNP04004 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.35■□□□□ 0.37
VTNP04004 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VTNP04004 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VTNP04004 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
VTNP04004 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.34■□□□□ 0.37
VTNP04004 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VTNP04004 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
VTNP04004 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VTNP04004 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VTNP04004 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VTNP04004 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VTNP04004 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
VTNP04004 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.34■□□□□ 0.37
VTNP04004 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VTNP04004 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.34■□□□□ 0.37
VTNP04004 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VTNP04004 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.34■□□□□ 0.37
VTNP04004 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VTNP04004 AL121723.1-201ENST00000445194 1519 ntBASIC17.34■□□□□ 0.37
VTNP04004 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VTNP04004 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VTNP04004 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VTNP04004 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.34■□□□□ 0.37
VTNP04004 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VTNP04004 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
VTNP04004 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.34■□□□□ 0.37
VTNP04004 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.34■□□□□ 0.37
VTNP04004 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.34■□□□□ 0.37
VTNP04004 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
VTNP04004 AC020916.1-201ENST00000587762 1774 ntBASIC17.34■□□□□ 0.37
VTNP04004 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VTNP04004 AL049840.4-201ENST00000602422 811 ntBASIC17.34■□□□□ 0.37
VTNP04004 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
VTNP04004 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
VTNP04004 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
VTNP04004 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.34■□□□□ 0.37
VTNP04004 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.34■□□□□ 0.37
VTNP04004 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.34■□□□□ 0.37
VTNP04004 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
VTNP04004 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms