Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.89■□□□□ 0.61
COL1A1P02452 AC093433.1-201ENST00000458048 571 ntBASIC18.89■□□□□ 0.61
COL1A1P02452 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC18.89■□□□□ 0.61
COL1A1P02452 AC022137.2-201ENST00000503482 481 ntBASIC18.89■□□□□ 0.61
COL1A1P02452 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.89■□□□□ 0.61
COL1A1P02452 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC18.89■□□□□ 0.61
COL1A1P02452 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.89■□□□□ 0.61
COL1A1P02452 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC18.89■□□□□ 0.61
COL1A1P02452 KRT90P-201ENST00000549264 1064 ntBASIC18.89■□□□□ 0.61
COL1A1P02452 IGHV3OR16-16-201ENST00000563644 343 ntBASIC18.89■□□□□ 0.61
COL1A1P02452 GPR182-203ENST00000622922 591 ntBASIC18.89■□□□□ 0.61
COL1A1P02452 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL1A1P02452 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.89■□□□□ 0.61
COL1A1P02452 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.89■□□□□ 0.61
COL1A1P02452 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.89■□□□□ 0.61
COL1A1P02452 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL1A1P02452 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL1A1P02452 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL1A1P02452 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL1A1P02452 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
COL1A1P02452 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL1A1P02452 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL1A1P02452 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL1A1P02452 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL1A1P02452 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL1A1P02452 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL1A1P02452 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL1A1P02452 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
COL1A1P02452 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.88■□□□□ 0.61
COL1A1P02452 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL1A1P02452 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
COL1A1P02452 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL1A1P02452 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL1A1P02452 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC18.88■□□□□ 0.61
COL1A1P02452 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.88■□□□□ 0.61
COL1A1P02452 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
COL1A1P02452 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC18.88■□□□□ 0.61
COL1A1P02452 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL1A1P02452 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL1A1P02452 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC18.88■□□□□ 0.61
COL1A1P02452 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.88■□□□□ 0.61
COL1A1P02452 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC18.88■□□□□ 0.61
COL1A1P02452 AC009486.1-201ENST00000569860 813 ntBASIC18.88■□□□□ 0.61
COL1A1P02452 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
COL1A1P02452 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
COL1A1P02452 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.88■□□□□ 0.61
COL1A1P02452 AC068587.10-201ENST00000641210 219 ntBASIC18.88■□□□□ 0.61
COL1A1P02452 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
COL1A1P02452 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
COL1A1P02452 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.88■□□□□ 0.61
COL1A1P02452 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.88■□□□□ 0.61
COL1A1P02452 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
COL1A1P02452 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
COL1A1P02452 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
COL1A1P02452 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL1A1P02452 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL1A1P02452 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL1A1P02452 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.87■□□□□ 0.61
COL1A1P02452 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC18.87■□□□□ 0.61
COL1A1P02452 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC18.87■□□□□ 0.61
COL1A1P02452 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
COL1A1P02452 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.87■□□□□ 0.61
COL1A1P02452 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COL1A1P02452 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.87■□□□□ 0.61
COL1A1P02452 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.87■□□□□ 0.61
COL1A1P02452 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL1A1P02452 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL1A1P02452 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.87■□□□□ 0.61
COL1A1P02452 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.87■□□□□ 0.61
COL1A1P02452 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
COL1A1P02452 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
COL1A1P02452 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL1A1P02452 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
COL1A1P02452 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COL1A1P02452 YBX1P6-201ENST00000442962 1002 ntBASIC18.87■□□□□ 0.61
COL1A1P02452 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
COL1A1P02452 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COL1A1P02452 AC103810.3-201ENST00000583567 96 ntBASIC18.87■□□□□ 0.61
COL1A1P02452 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC18.87■□□□□ 0.61
COL1A1P02452 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
COL1A1P02452 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COL1A1P02452 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.87■□□□□ 0.61
COL1A1P02452 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL1A1P02452 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.87■□□□□ 0.61
COL1A1P02452 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL1A1P02452 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.87■□□□□ 0.61
COL1A1P02452 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
COL1A1P02452 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.87■□□□□ 0.61
COL1A1P02452 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL1A1P02452 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COL1A1P02452 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL1A1P02452 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.86■□□□□ 0.61
COL1A1P02452 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL1A1P02452 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL1A1P02452 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL1A1P02452 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL1A1P02452 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
COL1A1P02452 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.86■□□□□ 0.61
COL1A1P02452 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL1A1P02452 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms