Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.51■□□□□ 0.55
CDKL5O76039 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
CDKL5O76039 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDKL5O76039 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDKL5O76039 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDKL5O76039 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKL5O76039 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKL5O76039 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.5■□□□□ 0.55
CDKL5O76039 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CDKL5O76039 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDKL5O76039 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CDKL5O76039 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKL5O76039 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CDKL5O76039 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKL5O76039 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKL5O76039 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKL5O76039 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.5■□□□□ 0.55
CDKL5O76039 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.5■□□□□ 0.55
CDKL5O76039 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKL5O76039 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.5■□□□□ 0.55
CDKL5O76039 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKL5O76039 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CDKL5O76039 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDKL5O76039 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.5■□□□□ 0.55
CDKL5O76039 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKL5O76039 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKL5O76039 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDKL5O76039 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKL5O76039 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKL5O76039 AZGP1P1-201ENST00000411909 902 ntBASIC18.5■□□□□ 0.55
CDKL5O76039 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.5■□□□□ 0.55
CDKL5O76039 CNN2P2-201ENST00000443536 909 ntBASIC18.5■□□□□ 0.55
CDKL5O76039 CNN2P3-201ENST00000450201 906 ntBASIC18.5■□□□□ 0.55
CDKL5O76039 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.5■□□□□ 0.55
CDKL5O76039 HNRNPUP1-201ENST00000554987 333 ntBASIC18.5■□□□□ 0.55
CDKL5O76039 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
CDKL5O76039 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.5■□□□□ 0.55
CDKL5O76039 AL136317.3-201ENST00000618497 906 ntBASIC18.5■□□□□ 0.55
CDKL5O76039 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKL5O76039 KRT8P12-202ENST00000472924 1397 ntBASIC18.5■□□□□ 0.55
CDKL5O76039 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.5■□□□□ 0.55
CDKL5O76039 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKL5O76039 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.5■□□□□ 0.55
CDKL5O76039 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKL5O76039 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKL5O76039 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKL5O76039 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKL5O76039 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKL5O76039 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CDKL5O76039 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC18.49■□□□□ 0.55
CDKL5O76039 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.49■□□□□ 0.55
CDKL5O76039 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CDKL5O76039 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.49■□□□□ 0.55
CDKL5O76039 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKL5O76039 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKL5O76039 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDKL5O76039 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CDKL5O76039 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CDKL5O76039 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.49■□□□□ 0.55
CDKL5O76039 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKL5O76039 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKL5O76039 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.49■□□□□ 0.55
CDKL5O76039 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKL5O76039 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.49■□□□□ 0.55
CDKL5O76039 AC136604.1-201ENST00000418535 575 ntBASIC18.49■□□□□ 0.55
CDKL5O76039 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKL5O76039 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.49■□□□□ 0.55
CDKL5O76039 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.49■□□□□ 0.55
CDKL5O76039 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CDKL5O76039 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.49■□□□□ 0.55
CDKL5O76039 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.49■□□□□ 0.55
CDKL5O76039 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDKL5O76039 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CDKL5O76039 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CDKL5O76039 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDKL5O76039 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CDKL5O76039 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.49■□□□□ 0.55
CDKL5O76039 CETN4P-206ENST00000642099 2168 ntBASIC18.49■□□□□ 0.55
CDKL5O76039 AC092850.2-201ENST00000623821 2697 ntBASIC18.49■□□□□ 0.55
CDKL5O76039 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CDKL5O76039 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKL5O76039 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDKL5O76039 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CDKL5O76039 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CDKL5O76039 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKL5O76039 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKL5O76039 FLJ16779-201ENST00000612722 7638 ntBASIC18.49■□□□□ 0.55
CDKL5O76039 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.48■□□□□ 0.55
CDKL5O76039 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL5O76039 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL5O76039 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL5O76039 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL5O76039 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.48■□□□□ 0.55
CDKL5O76039 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CDKL5O76039 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL5O76039 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CDKL5O76039 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL5O76039 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CDKL5O76039 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL5O76039 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms