Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
UPK1BO75841 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.9□□□□□ -0.18
UPK1BO75841 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
UPK1BO75841 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UPK1BO75841 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UPK1BO75841 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
UPK1BO75841 LINC00982-205ENST00000420957 435 ntBASIC13.9□□□□□ -0.18
UPK1BO75841 AC026271.2-201ENST00000428091 497 ntBASIC13.9□□□□□ -0.18
UPK1BO75841 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC13.9□□□□□ -0.18
UPK1BO75841 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC13.9□□□□□ -0.18
UPK1BO75841 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
UPK1BO75841 AL137784.2-201ENST00000607332 1000 ntBASIC13.9□□□□□ -0.18
UPK1BO75841 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
UPK1BO75841 AL109923.1-201ENST00000618799 583 ntBASIC13.9□□□□□ -0.18
UPK1BO75841 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC13.9□□□□□ -0.18
UPK1BO75841 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.9□□□□□ -0.18
UPK1BO75841 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UPK1BO75841 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UPK1BO75841 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UPK1BO75841 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.18
UPK1BO75841 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
UPK1BO75841 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UPK1BO75841 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.9□□□□□ -0.18
UPK1BO75841 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
UPK1BO75841 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UPK1BO75841 MTHFR-210ENST00000641407 2387 ntBASIC13.9□□□□□ -0.18
UPK1BO75841 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
UPK1BO75841 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.9□□□□□ -0.18
UPK1BO75841 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
UPK1BO75841 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.9□□□□□ -0.18
UPK1BO75841 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.9□□□□□ -0.18
UPK1BO75841 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UPK1BO75841 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.9□□□□□ -0.18
UPK1BO75841 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
UPK1BO75841 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
UPK1BO75841 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
UPK1BO75841 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC13.9□□□□□ -0.19
UPK1BO75841 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.89□□□□□ -0.19
UPK1BO75841 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
UPK1BO75841 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1BO75841 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1BO75841 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1BO75841 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.89□□□□□ -0.19
UPK1BO75841 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1BO75841 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1BO75841 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
UPK1BO75841 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1BO75841 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.89□□□□□ -0.19
UPK1BO75841 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC13.89□□□□□ -0.19
UPK1BO75841 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1BO75841 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
UPK1BO75841 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1BO75841 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
UPK1BO75841 INGX-201ENST00000359239 846 ntBASIC13.89□□□□□ -0.19
UPK1BO75841 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1BO75841 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC13.89□□□□□ -0.19
UPK1BO75841 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC13.89□□□□□ -0.19
UPK1BO75841 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1BO75841 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC13.89□□□□□ -0.19
UPK1BO75841 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1BO75841 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.89□□□□□ -0.19
UPK1BO75841 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.89□□□□□ -0.19
UPK1BO75841 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC13.89□□□□□ -0.19
UPK1BO75841 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC13.89□□□□□ -0.19
UPK1BO75841 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1BO75841 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1BO75841 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.89□□□□□ -0.19
UPK1BO75841 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1BO75841 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.89□□□□□ -0.19
UPK1BO75841 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.89□□□□□ -0.19
UPK1BO75841 AC007326.2-201ENST00000624224 7579 ntBASIC13.89□□□□□ -0.19
UPK1BO75841 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1BO75841 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
UPK1BO75841 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1BO75841 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1BO75841 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1BO75841 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
UPK1BO75841 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1BO75841 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1BO75841 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1BO75841 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
UPK1BO75841 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC13.89□□□□□ -0.19
UPK1BO75841 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
UPK1BO75841 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
UPK1BO75841 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
UPK1BO75841 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1BO75841 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1BO75841 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1BO75841 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1BO75841 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.88□□□□□ -0.19
UPK1BO75841 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1BO75841 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1BO75841 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1BO75841 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1BO75841 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1BO75841 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1BO75841 AP001267.2-201ENST00000532619 2086 ntBASIC13.88□□□□□ -0.19
UPK1BO75841 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1BO75841 UNC93B2-201ENST00000285383 730 ntBASIC13.88□□□□□ -0.19
UPK1BO75841 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms