Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
ZNF253O75346 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF253O75346 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF253O75346 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.5□□□□□ -0.41
ZNF253O75346 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF253O75346 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF253O75346 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF253O75346 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF253O75346 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
ZNF253O75346 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF253O75346 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF253O75346 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF253O75346 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF253O75346 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF253O75346 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.49□□□□□ -0.41
ZNF253O75346 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF253O75346 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
ZNF253O75346 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC12.49□□□□□ -0.41
ZNF253O75346 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
ZNF253O75346 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
ZNF253O75346 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC12.49□□□□□ -0.41
ZNF253O75346 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.49□□□□□ -0.41
ZNF253O75346 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
ZNF253O75346 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
ZNF253O75346 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF253O75346 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF253O75346 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF253O75346 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC12.49□□□□□ -0.41
ZNF253O75346 AC012569.1-201ENST00000591191 1524 ntBASIC12.49□□□□□ -0.41
ZNF253O75346 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF253O75346 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC12.49□□□□□ -0.41
ZNF253O75346 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF253O75346 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
ZNF253O75346 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF253O75346 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC12.49□□□□□ -0.41
ZNF253O75346 VMO1-203ENST00000416307 712 ntTSL 2 BASIC12.49□□□□□ -0.41
ZNF253O75346 SAPCD2P3-201ENST00000455031 850 ntBASIC12.49□□□□□ -0.41
ZNF253O75346 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC12.49□□□□□ -0.41
ZNF253O75346 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
ZNF253O75346 AL160237.2-201ENST00000556165 472 ntBASIC12.49□□□□□ -0.41
ZNF253O75346 AC021087.4-201ENST00000563761 564 ntBASIC12.49□□□□□ -0.41
ZNF253O75346 AC091304.2-201ENST00000564639 760 ntBASIC12.49□□□□□ -0.41
ZNF253O75346 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC12.49□□□□□ -0.41
ZNF253O75346 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF253O75346 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC12.49□□□□□ -0.41
ZNF253O75346 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC12.49□□□□□ -0.41
ZNF253O75346 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF253O75346 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
ZNF253O75346 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.49□□□□□ -0.41
ZNF253O75346 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
ZNF253O75346 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.49□□□□□ -0.41
ZNF253O75346 CICP24-201ENST00000605464 2705 ntBASIC12.49□□□□□ -0.41
ZNF253O75346 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF253O75346 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF253O75346 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
ZNF253O75346 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF253O75346 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF253O75346 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF253O75346 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF253O75346 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF253O75346 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC12.48□□□□□ -0.41
ZNF253O75346 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.48□□□□□ -0.41
ZNF253O75346 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF253O75346 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC12.48□□□□□ -0.41
ZNF253O75346 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC12.48□□□□□ -0.41
ZNF253O75346 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF253O75346 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF253O75346 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF253O75346 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
ZNF253O75346 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.48□□□□□ -0.41
ZNF253O75346 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF253O75346 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
ZNF253O75346 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF253O75346 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF253O75346 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF253O75346 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF253O75346 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF253O75346 DFFB-203ENST00000341385 572 ntTSL 5 BASIC12.48□□□□□ -0.41
ZNF253O75346 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC12.48□□□□□ -0.41
ZNF253O75346 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC12.48□□□□□ -0.41
ZNF253O75346 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF253O75346 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
ZNF253O75346 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC12.48□□□□□ -0.41
ZNF253O75346 RNF146-204ENST00000476956 884 ntTSL 2 BASIC12.48□□□□□ -0.41
ZNF253O75346 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC12.48□□□□□ -0.41
ZNF253O75346 IGHV3-65-201ENST00000523210 341 ntBASIC12.48□□□□□ -0.41
ZNF253O75346 CIPC-205ENST00000555437 566 ntTSL 3 BASIC12.48□□□□□ -0.41
ZNF253O75346 RIN3-211ENST00000557762 517 ntTSL 3 BASIC12.48□□□□□ -0.41
ZNF253O75346 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC12.48□□□□□ -0.41
ZNF253O75346 TPM1-226ENST00000560959 925 ntTSL 2 BASIC12.48□□□□□ -0.41
ZNF253O75346 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF253O75346 CYGB-205ENST00000590175 830 ntTSL 3 BASIC12.48□□□□□ -0.41
ZNF253O75346 MIR1199-201ENST00000621445 119 ntBASIC12.48□□□□□ -0.41
ZNF253O75346 AC093458.2-201ENST00000623150 629 ntBASIC12.48□□□□□ -0.41
ZNF253O75346 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
ZNF253O75346 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.48□□□□□ -0.41
ZNF253O75346 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
ZNF253O75346 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF253O75346 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
ZNF253O75346 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms