Protein–RNA interactions for Protein: O75293

GADD45B, Growth arrest and DNA damage-inducible protein GADD45 beta, humanhuman

Predicted RBP Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45BO75293 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GADD45BO75293 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GADD45BO75293 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
GADD45BO75293 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.24■□□□□ 0.51
GADD45BO75293 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
GADD45BO75293 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
GADD45BO75293 MIR1224-201ENST00000408193 85 ntBASIC18.24■□□□□ 0.51
GADD45BO75293 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
GADD45BO75293 AC061975.2-201ENST00000581722 295 ntBASIC18.24■□□□□ 0.51
GADD45BO75293 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
GADD45BO75293 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.24■□□□□ 0.51
GADD45BO75293 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GADD45BO75293 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
GADD45BO75293 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC18.24■□□□□ 0.51
GADD45BO75293 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC18.24■□□□□ 0.51
GADD45BO75293 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GADD45BO75293 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GADD45BO75293 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GADD45BO75293 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GADD45BO75293 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
GADD45BO75293 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
GADD45BO75293 AC025580.3-201ENST00000617932 1424 ntBASIC18.23■□□□□ 0.51
GADD45BO75293 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
GADD45BO75293 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.23■□□□□ 0.51
GADD45BO75293 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
GADD45BO75293 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GADD45BO75293 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GADD45BO75293 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GADD45BO75293 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
GADD45BO75293 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
GADD45BO75293 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GADD45BO75293 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
GADD45BO75293 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC18.23■□□□□ 0.51
GADD45BO75293 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
GADD45BO75293 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GADD45BO75293 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GADD45BO75293 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GADD45BO75293 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GADD45BO75293 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.23■□□□□ 0.51
GADD45BO75293 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC18.23■□□□□ 0.51
GADD45BO75293 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.23■□□□□ 0.51
GADD45BO75293 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.23■□□□□ 0.51
GADD45BO75293 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GADD45BO75293 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
GADD45BO75293 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GADD45BO75293 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
GADD45BO75293 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
GADD45BO75293 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.23■□□□□ 0.51
GADD45BO75293 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.23■□□□□ 0.51
GADD45BO75293 RNA5SP415-201ENST00000517246 115 ntBASIC18.23■□□□□ 0.51
GADD45BO75293 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.23■□□□□ 0.51
GADD45BO75293 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
GADD45BO75293 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.23■□□□□ 0.51
GADD45BO75293 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.23■□□□□ 0.51
GADD45BO75293 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GADD45BO75293 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GADD45BO75293 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GADD45BO75293 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC18.23■□□□□ 0.51
GADD45BO75293 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
GADD45BO75293 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
GADD45BO75293 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.23■□□□□ 0.51
GADD45BO75293 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
GADD45BO75293 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GADD45BO75293 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GADD45BO75293 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC18.23■□□□□ 0.51
GADD45BO75293 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.23■□□□□ 0.51
GADD45BO75293 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GADD45BO75293 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC18.23■□□□□ 0.51
GADD45BO75293 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
GADD45BO75293 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
GADD45BO75293 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
GADD45BO75293 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GADD45BO75293 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GADD45BO75293 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GADD45BO75293 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
GADD45BO75293 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GADD45BO75293 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GADD45BO75293 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC18.22■□□□□ 0.51
GADD45BO75293 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
GADD45BO75293 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GADD45BO75293 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GADD45BO75293 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.22■□□□□ 0.51
GADD45BO75293 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
GADD45BO75293 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.22■□□□□ 0.51
GADD45BO75293 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.22■□□□□ 0.51
GADD45BO75293 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.22■□□□□ 0.51
GADD45BO75293 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GADD45BO75293 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.22■□□□□ 0.51
GADD45BO75293 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
GADD45BO75293 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.22■□□□□ 0.51
GADD45BO75293 AC023141.13-201ENST00000604991 943 ntBASIC18.22■□□□□ 0.51
GADD45BO75293 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.22■□□□□ 0.51
GADD45BO75293 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GADD45BO75293 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GADD45BO75293 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.22■□□□□ 0.51
GADD45BO75293 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GADD45BO75293 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.22■□□□□ 0.51
GADD45BO75293 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
GADD45BO75293 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
GADD45BO75293 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms